Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2601 ATGGTTCCACCACCATCACATACCAAACTCACCAATGATGTTGTGTCCAACGGGAAACAGTACTCTCCTCCTGATGACTTAGAGACCTTCTACGTCAAACTCACTGAAGTGTTGGACTCCTCTGGGTTCAATCTCATTCTCAATGTCCGAGAAACATCCTTAGACTTGTACCTGTTCTACTTGGAGGTCACCAAAAGAGGAGGTTTTCACAAGGTTGGTCTACAAAACAAATGGCTTGAAGTTGTCTCTGCACTAAAACTAGAAGGCAACAATGCAATCTTATCTGCTCAAGTTGAAAAGCTCTATGCTACACTTCTATACAAATTTGAGAAATTGTACTTCTACAGGTTTCCTGCAACTGGCATCCCCAAAGGACTTAAAAGGAAGCAGAACTCACCTACTGGTTTATCTCAAATAATGACTGATGAAGATAATCTGAAGGTGGCAAAGATGTCCAAGTACTACTCTAGCCAAATGACAGGAGCTGGCTTTCAAGAATCTCGAGTGCTTCTACATGCACCCTCAAATGACAAAGAAAAGAAGAAACAGCGAGGTGCTCCATCGGGAAAAAGTGGATATCAAATATTCCTCAAGCAGGAATGTGCTCGATTGAAAGCTCATGATCAAGACATAGATGGAAAAAGAATCCTTTGCATGGCTGTTGATGCTTGGCAGAAGATGTCTGACACTGATAAACAGCCATATGTGGATGAAAGCAAGAAGATAAAGGAGAAAAACAAGGAAGCAGTGATCATTGACAATAAACAGAAGAGAACTGAAGATCTTAAGAAGGATGAAAAAAAGAGCGATGAAGATCTTAAGAAGGATGAAAAGAGGCCTAGTGTGTGCGGTGACTACTGTGTAACTTCACAACCTCTACCAAATTACTCTTTTGTCAACAATGCATCTGTGGAGTTAGCTCTTAAAATGACAGAAAAATCACTCAAGGATCCCTTCTTCTCAGTTGATTAG 972 0.4074 MVPPPSHTKLTNDVVSNGKQYSPPDDLETFYVKLTEVLDSSGFNLILNVRETSLDLYLFYLEVTKRGGFHKVGLQNKWLEVVSALKLEGNNAILSAQVEKLYATLLYKFEKLYFYRFPATGIPKGLKRKQNSPTGLSQIMTDEDNLKVAKMSKYYSSQMTGAGFQESRVLLHAPSNDKEKKKQRGAPSGKSGYQIFLKQECARLKAHDQDIDGKRILCMAVDAWQKMSDTDKQPYVDESKKIKEKNKEAVIIDNKQKRTEDLKKDEKKSDEDLKKDEKRPSVCGDYCVTSQPLPNYSFVNNASVELALKMTEKSLKDPFFSVD* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2601 323 ProSiteProfiles ARID domain profile. 17 114 IPR001606 GO:0003677
Mal7g2601 323 SMART bright_3 25 115 IPR001606 GO:0003677
Mal7g2601 323 PANTHER HMG (HIGH MOBILITY GROUP) BOX PROTEIN 10 316 - -
Mal7g2601 323 MobiDBLite consensus disorder prediction 257 282 - -
Mal7g2601 323 Pfam ARID/BRIGHT DNA binding domain 28 110 IPR001606 GO:0003677
Mal7g2601 323 SUPERFAMILY ARID-like 22 114 IPR036431 GO:0003677
Mal7g2601 323 MobiDBLite consensus disorder prediction 1 21 - -
Mal7g2601 323 Gene3D High mobility group box domain 172 251 IPR036910 -
Mal7g2601 323 Gene3D - 8 119 IPR036431 GO:0003677
Mal7g2601 323 SUPERFAMILY HMG-box 177 248 IPR036910 -
Mal7g2601 323 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 10 316 - -
Mal7g2601 323 SMART ARID_2 21 110 - -
Mal7g2601 323 Pfam HMG (high mobility group) box 191 249 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2601 Mal-Chr7 87844490 87846964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2601 30 247 ARID Transcription Factor Family AT3G13350 24.219 2.75e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal7g2601 ARID 4.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2601 - - mtr:MTR_5g095070 330.487