Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2600 ATGTATGCAACACAATTACGGGAAGAAGAAGTTTTAAAGGGTTCAAAGTGTGAAGATTGTGGGAACCAAGCAAAGAAGGATTGTGCATACACAAGGTGCAGAAATTGTTGCAAGAACAAAAAGTTTAACTGCCAAACACATATCAGAAGCACTTGGATTCCTGCTGATAGAAGACGTCACAGAATGGACCATCCTTCTAATCAGCACCACCTTCATGAACATAAAAGGCACAAGCAGATCAACACTATTTCAAGTTCTGATGATGAGTTCAAGTTCCCGGCTGTTACGAGTTCCATGGCGAGATTGACACGTGTTCAGGTTCGCTCTATGGACCAAACGGTTAATGAAACGGCCTATCAAACAAGTGTGGAAATTGGAGGACATGTATTTAGTGGTATTCTTTATGATCAAGGCCCTGATCAACAAAGCTTCAATAATATAGACCCTCTTGATCAGCAACAAAATCTCAATCTTTTTAGTAGTAATTCAATCCACACGGGTGATGATGGTGCTGCTGCTACTGGTTCTCATCGTCGCCTTTTATTTCCTCCACCGCATCCATTACCTTCTTTCAGGCCCGGTATGCCGTATTAG 594 0.4192 MYATQLREEEVLKGSKCEDCGNQAKKDCAYTRCRNCCKNKKFNCQTHIRSTWIPADRRRHRMDHPSNQHHLHEHKRHKQINTISSSDDEFKFPAVTSSMARLTRVQVRSMDQTVNETAYQTSVEIGGHVFSGILYDQGPDQQSFNNIDPLDQQQNLNLFSSNSIHTGDDGAAATGSHRRLLFPPPHPLPSFRPGMPY* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2600 197 PANTHER BNAC01G23660D PROTEIN 4 191 - -
Mal7g2600 197 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 16 58 IPR006510 -
Mal7g2600 197 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 91 139 IPR006511 -
Mal7g2600 197 Pfam Domain of unknown function (DUF702) 14 140 - -
Mal7g2600 197 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 4 191 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2600 Mal-Chr7 87840945 87841643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2600 11 138 C2H2 Transcription Factor Family AT2G21400 50.000 6.25e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal7g2600 DUF702 2.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2600 - - mtr:MTR_4g071110 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2600 7 87840945 87841643 Mal7g2600 7 87840945 87841643 ECH
Mal1g5973 1 137617703 137619185 Mal7g2600 7 87840945 87841643 ECH
Mal2g0518 2 6075313 6076745 Mal7g2600 7 87840945 87841643 ECH