Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2598 ATGGCTTCCGATTCTACCCCTATGGATTTCAGCAACGGTCCATCTTCACCAGACAATTCCAATTCAAGTCCAATCGCAAACACATACTCTTCCCCCGGCCGCCGTCGCCGCCGTCAATCAACCACTCCCTCCGGAACTCCTCAGCCGAACAGATCTCGCTTCGCTTCATCAGATGCCACTCCAACTCCCTCCCGCCACCGTCGTGGTGGCGGCATCCCCTCCGGCCGCCGTGTCCCCGCCACACCAACCTCCACATCCGATGACGTACCTATGTCCTCGGAAGGTGGTGACGGTTACGACGGTGATGACGCCGGTCCGACTTACGTTTGGGGGACTAACATAAGTGTGGAGGATGTGAATGATGCGATTCAGAGGTTTTTGAAGAATTTTAAAGAAGAATCTGCTTCTCAAATTGATGTTGATCATATGGATTTCGGTAGGGAAGAAGGGAAGTATGAGAAATTGATTAAGCAGGTTATTGAATTAGAAGGTGAATCTATTGATGTTGATGCACGTGATGTGCTTTATCAAGATCGAGACTTGTATAATAAGATGGTTAGGTACCCTCTTGAGGTGCTTGCGATTTTTGATATGGTTTTGATGAATATGGTTACTAGAATGAACCCAATGTTTGAGAAGCATGTTCAAACTAGGATTTTTAATCTCAAAAGCTCAACTTCTATGAGAAATTTGAACCCTTCTGATATTGAGAGGATGGTATCGATGAAGGGAATGATTATTCGATGTAGTTCGATTATACCGGAAATTAGGGAAGCTATATTTAGGTGTCTTGTGTGTGGATTCTGTTCTGATCCGGTTCCGGTGGAGAGAGGACGAATTGCGGAACCTACTGTATGCTTGAGGGAAGAGTGTCAGTCCAGGAATTCGATGACACTTGTTCACAACCGATGCAAGTTTTCTGATAAACAAATTGTGAGGCTTCAGGAGACACCTGACGAGATACCTGAAGGAGGAACACCGCACACTGTTAGCTTGCTGTTGCATGACAAATTGGTGGATACTGGAAAGCCAGGTGACAGAGTTGAGGTGACTGGTATATACAGGGCTATGAGTGTTAGGGTGGGACCAACTCAGAGAACTGTTAAGTCATTGTTCAAAACGTATATTGATTGTCTTCACATAAAAAAGACATCAAAGTCCCAGATGCTAGTTGAGGATGCTATGGAGGTTGACAATGGCCAGGGCAGAAATACAGAAGAAGTTCTATTTGACGAAGAAAAGGTGGCTAAACTGAAGGAGCTCTCAAAACAACCAGATATATATGAAAGACTGACAAAGTCACTGGCTCCAAACATCTGGGAGCTAGATGATGTAAAGAAAGGTCTTCTTTGCCAGCTTTTTGGTGGCAATGCTTTAAAGTTGGCATCTGGTGCTAGCTTTCGTGGTGATATAAATATTCTCCTTGTTGGTGATCCTGGTACAAGCAAGTCGCAGTTACTTCAGTACATACACAAACTATCTCCACGTGGCATTTACACCAGTGGAAGGGGGAGCTCGGCTGTTGGATTGACTGCTTATGTGGCCAAAGATCCCGAAACAGGCGAAACTGTTCTTGAGAGTGGTGCCCTTGTTTTGAGCGACCGAGGTATCTGCTGCATAGATGAATTTGACAAAATGTCTGAAAATGCAAGGAGCATGTTACATGAGGTGATGGAACAACAAACCGTTTCAATAGCAAAGGCAGGCATTATTGCTTCCCTCAATGCTAGGACTTCAGTGTTGGCTTGTGCAAACCCTAGTGGGTCAAGATATAACCCCCGCTTGTCTGTCATTGACAACATACACCTTCCTCCCACTCTTTTATCCAGGTTTGATTTGATTTACTTGATGCTTGATAAGGCTGATGAACAGACTGACAAACGACTTGCCAAACATATTGTTTCCCTATTCTATAAGGATTATGAGAACATAGAGCAGGATGTTTTGGACCTATCTACACTGACTGATTATGTTAGCTATGCCCGGAAGCACATACACCCACAACTATCAGATGAAGCTGCTGATGAATTGATTACAGGCTATGTAAAAATAAGGGGTAGGGGAAAATTTACTGGAAGTAGCAAAAAGGTAATAACAGCAACTCCAAGGCAGATTGAGAGTCTACTGCGCCTTAGTGAAGCATTGGCTCGAATTCGCTTCTCAGAATGGGTCGAAAAGCATGATGTAGTAGAGGCATTTCGGCTTTTGGAAGTTGCGATGCAGCAGTCTGCAATGGATATCAGAACTGGAACTATTGACATGGATCTTATTACTACTGGTGTTTCGGCAAGTGAAAGGATGAGACGAGAAAGTTTGATACAAGATACTCGCAACATAATTATGGAGAAGATGCAAATTGGACGTTCCATGCGGTTATTGGAGATATTGGAAGAATTGAAGAATCAGAGCCCTGCCAGCGAAATTCATCTTAATGATCTGAGGAGTGCAGTTGCTACTCTTGCCAGCGAAGGATTTGTTTCCATGGCTGGTGACAGTGTAAAAAGAACATGA 2511 0.4405 MASDSTPMDFSNGPSSPDNSNSSPIANTYSSPGRRRRRQSTTPSGTPQPNRSRFASSDATPTPSRHRRGGGIPSGRRVPATPTSTSDDVPMSSEGGDGYDGDDAGPTYVWGTNISVEDVNDAIQRFLKNFKEESASQIDVDHMDFGREEGKYEKLIKQVIELEGESIDVDARDVLYQDRDLYNKMVRYPLEVLAIFDMVLMNMVTRMNPMFEKHVQTRIFNLKSSTSMRNLNPSDIERMVSMKGMIIRCSSIIPEIREAIFRCLVCGFCSDPVPVERGRIAEPTVCLREECQSRNSMTLVHNRCKFSDKQIVRLQETPDEIPEGGTPHTVSLLLHDKLVDTGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTSKSQMLVEDAMEVDNGQGRNTEEVLFDEEKVAKLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEQTDKRLAKHIVSLFYKDYENIEQDVLDLSTLTDYVSYARKHIHPQLSDEAADELITGYVKIRGRGKFTGSSKKVITATPRQIESLLRLSEALARIRFSEWVEKHDVVEAFRLLEVAMQQSAMDIRTGTIDMDLITTGVSASERMRRESLIQDTRNIIMEKMQIGRSMRLLEILEELKNQSPASEIHLNDLRSAVATLASEGFVSMAGDSVKRT* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2598 836 Pfam MCM AAA-lid domain 653 739 IPR041562 -
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein family signature 468 483 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein family signature 580 592 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein family signature 556 569 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein family signature 607 615 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein family signature 528 542 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 SUPERFAMILY Nucleic acid-binding proteins 147 378 IPR012340 -
Mal7g2598 836 Coils Coil 835 836 - -
Mal7g2598 836 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 76 835 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 Pfam MCM N-terminal domain 122 221 IPR027925 -
Mal7g2598 836 ProSitePatterns MCM family signature. 536 544 IPR018525 GO:0003677|GO:0005524|GO:0006260
Mal7g2598 836 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 76 835 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mal7g2598 836 Gene3D - 255 307 - -
Mal7g2598 836 Gene3D - 113 222 - -
Mal7g2598 836 Gene3D - 408 752 IPR027417 -
Mal7g2598 836 MobiDBLite consensus disorder prediction 1 105 - -
Mal7g2598 836 Pfam MCM P-loop domain 415 636 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 MobiDBLite consensus disorder prediction 1 63 - -
Mal7g2598 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 740 IPR027417 -
Mal7g2598 836 ProSiteProfiles MCM family domain profile. 427 633 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 SMART mcm 224 741 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 589 606 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 250 263 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 301 313 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 443 454 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mal7g2598 836 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 741 750 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mal7g2598 836 CDD MCM4 430 739 - -
Mal7g2598 836 Pfam MCM OB domain 228 357 IPR033762 -
Mal7g2598 836 Gene3D - 228 367 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2598 Mal-Chr7 87826229 87831106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2598 1 835 Core DNA Replication Machinery Family AT2G16440 71.860 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2598 K02212 - gmx:100782586 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2598 7 87826229 87831106 Mal7g2598 7 87826229 87831106 ECH