Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2555 ATGTTACATTGTCTCAACACTTCTGGAAATCTTGGAGGAGGAACCATTTCCGACATGACAGTGTTGGAAAGACAAAGAGCAAGGAAGAAATTCCAACATGAACAAGATCAAGAACACCGAGGTTACTTTTGTGGAAATGGATTCTCTTCTTCTCAGCAGCAATTTATGATGCTTGGTTGTGATTCTGCTCTTGGTGAGGTTGTAGCTAACTCTATGAAACCTGACCCGGATTATGAAACCGGGTCAGGTGAAGAAACCGTTAAGAAAAGGAAAGTAGATAATAAGGTGGTGATGAATTCTAAAGACAAGAAGATCAAAGTGAGTGCAGAAGAGGATTCCAAAATTACAGAGCAAATAAAGGTGCAGAAGAATGCAAAGTCCAACAATGGAAACAAAAACAAGAGAGAAAATTGTGATGATACTTCCAAGGAAAATTCGAAAGGCTCTGAGGTTCAAAATCAAAAGCCTGATTACATTCATGTTCGAGCACGTCGTGGTCAAGCTACTGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATAAGTGAAAGGATGAAGTATTTGCAAGATTTAGTACCAGGATGCAACAAAATTGCAGGCAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAAAGACAAGTTGAGTTCTTGTCAATGAAATTAGCAGCTGTAAACCCAAGACTTGACTTCAACATTGATGAATTGTTTGCCAAAGAGGTGTTTACTCAAAATTTCCCAACCATAGGGATGCAATCAGAAATGACTAACTCTGCATATCTTCAATTCAATTCAGCACAACAACTAGTATCATGTTGCGGTGGATTAATAAACAATATGGGGATAATCCCTCCGGAAATTGGGGTTCGAAGGAACATTAACACCCCTGCATCTGCATCTTTACCCGAAACCTTTCTTGACTCGTCATATTTCACTAATATCTTACCCTCCTCAACTTGGGAAGGTGATTTTCAGAATTTTCACAGTGTAGATTTTGATCAAGGACGATCAACATCATTTCCTTCTCAGCCATTTACAGGTTTGATTGAAGCTAGCAATCTGAAGATGGAGATGTAA 1095 0.3863 MLHCLNTSGNLGGGTISDMTVLERQRARKKFQHEQDQEHRGYFCGNGFSSSQQQFMMLGCDSALGEVVANSMKPDPDYETGSGEETVKKRKVDNKVVMNSKDKKIKVSAEEDSKITEQIKVQKNAKSNNGNKNKRENCDDTSKENSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFTQNFPTIGMQSEMTNSAYLQFNSAQQLVSCCGGLINNMGIIPPEIGVRRNINTPASASLPETFLDSSYFTNILPSSTWEGDFQNFHSVDFDQGRSTSFPSQPFTGLIEASNLKMEM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2555 364 MobiDBLite consensus disorder prediction 121 156 - -
Mal7g2555 364 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Mal7g2555 364 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 80 344 IPR024097 GO:0006355
Mal7g2555 364 Gene3D - 164 238 IPR036638 GO:0046983
Mal7g2555 364 SMART finulus 173 223 IPR011598 GO:0046983
Mal7g2555 364 MobiDBLite consensus disorder prediction 129 146 - -
Mal7g2555 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 217 IPR011598 GO:0046983
Mal7g2555 364 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 80 344 - -
Mal7g2555 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 236 IPR036638 GO:0046983
Mal7g2555 364 CDD bHLH_AtBPE_like 157 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2555 Mal-Chr7 87200254 87202690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2555 9 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 45.161 3.98e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g2555 HLH 3.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2555 - - gmx:100794256 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2555 7 87200254 87202690 Mal7g2555 7 87200254 87202690 ECH
Mal7g2555 7 87200254 87202690 Mal6g1154 6 17666425 17668343 ECH