Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2550 ATGGCTTCTTCTGATGCTGAGTACCGGTGCTTCGTCGGTGGTCTTGCCTGGACCACCGACAGCGATGGCCTTGCCAAAGCCTTCTCTACCTTCGGCGAAATCACTGATTCCAAGGTTATTAACGATCGTGAAACTGGAAGGTCGAGAGGTTTTGGATTTGTGACGTTTGCGACGGAACAATCGATGAGAGATGCGATTGAAGGGATGAACGGTCAGGATGTTGACGGAAGGAATATTACTGTGAATGAAGCTCAGAGCCGTGGTAGCGGTGGAGGTGGACGTGGTGGCGGTGGATACAGTAGAGGTGGTGGTGGTGGAGGAGGTTATGGTGGTGGAGGTGATCGTGGTTATGGTGGTGGTAGGGACCGTGGTTACGGTGATGATGGTGGTTCCCGCTACTCTTCTCGCGGTGGTGGTGGTGGTGAAGGAAACTGGAGAAATTAG 444 0.5293 MASSDAEYRCFVGGLAWTTDSDGLAKAFSTFGEITDSKVINDRETGRSRGFGFVTFATEQSMRDAIEGMNGQDVDGRNITVNEAQSRGSGGGGRGGGGYSRGGGGGGGYGGGGDRGYGGGRDRGYGDDGGSRYSSRGGGGGEGNWRN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2550 147 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 147 - -
Mal7g2550 147 SUPERFAMILY RNA-binding domain, RBD 7 118 IPR035979 GO:0003676
Mal7g2550 147 MobiDBLite consensus disorder prediction 69 147 - -
Mal7g2550 147 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mal7g2550 147 Gene3D - 2 112 IPR012677 -
Mal7g2550 147 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Mal7g2550 147 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mal7g2550 147 PANTHER GEO13361P1-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2550 Mal-Chr7 87113455 87146006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2550 10 87 Eukaryotic Initiation Factors Gene Family AT2G23350 33.333 1.03e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2550 - K13195 ccaj:109800369 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2550 7 87113455 87146006 Mal7g2550 7 87113455 87146006 ECH