Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2549 ATGGCTGATGTTGAGTACCGTTGCTTCGTTGGTGGACTTGCCTGGGCCACCGACAGCGAAGCTCTAGAGACTGCTTTCTCTAAATTCGGCGAGATCGTTGATTCCAAGATTATTAACGATCGTGAAACTGGAAGATCAAGAGGTTTTGGATTTGTGACCTTCGCTGATGAGAAGGCCATGAACGATGCTATTGAAGGGATGAACGGTCAGGATTTGGACGGACGTAACATCACTGTGAACCAAGCTCAGAGCCGTGGATATGGTGGCGGCGGTGGATATGGTGGAGATCGTCGTGGTGGTGGAGGATATGGTGGTGGTGGGGGTGGATATGGTGGCGGCAGGGATCGCTCATATGGTGGAAATGACGGTGGTTATTAG 378 0.5106 MADVEYRCFVGGLAWATDSEALETAFSKFGEIVDSKIINDRETGRSRGFGFVTFADEKAMNDAIEGMNGQDLDGRNITVNQAQSRGYGGGGGYGGDRRGGGGYGGGGGGYGGGRDRSYGGNDGGY* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2549 125 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 2 125 - -
Mal7g2549 125 PANTHER GEO13361P1-RELATED 2 125 - -
Mal7g2549 125 SUPERFAMILY RNA-binding domain, RBD 6 114 IPR035979 GO:0003676
Mal7g2549 125 SMART rrm1_1 7 80 IPR000504 GO:0003723
Mal7g2549 125 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 77 IPR000504 GO:0003723
Mal7g2549 125 Gene3D - 2 125 IPR012677 -
Mal7g2549 125 MobiDBLite consensus disorder prediction 81 125 - -
Mal7g2549 125 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 84 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2549 Mal-Chr7 87095669 87096490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2549 9 65 C2H2 Transcription Factor Family AT2G19380 42.105 3.60e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2549 - K13195 thj:104824824 152.14