Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2547 ATGTCAAGAGGGAAACTTGAGTCCATAAGGAACCGTGTTGAGTGGTTGAAGTCGGTGCTTGTTAAGGGAGAATTTATTGGGGATGCAATGTTGAAGGGTGGAGATAATGTTTTGCTGCGGAGTGATAGGGAGTTGGATGAGATTGTTGAGTATTTAGAGTCCAATGGAGTTAGGAAGGAATGGATGGGCTATGTTGTGAGTCGGTGTCCGAAGTTGTTATCTTACAGCTTGGAAGAGGTGAAGATTCGTGTGCAGTTTTTTCTGGATATGGGTTTAGATGCGAAGGATTTTGGCACCATGGTTTTCGATTTTCCTAAAGTGCTCGGTTATTATACTCTGGAAGAAATGAACCGAAAGGTTGATTACTTGAAAGAATTCGGTCTTGAAAGTAAGGATGTTGGTAAGTTGCTTGCATTTAGGCCACAACTGATGGCTTGCAGCATTGAAGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATTACCCGAGATGGGATGAGGAGAATGCTTACCATTAAACCAATGGTATTTTGTGTTGACTTGGAGATGACCATTGTGCCAAAGGTAAAGTTTTTTCAGGACCTAGGGGTTCGAAACGACGGGATTGCCAACATGCTTGTAAAATTTCCCACTCTACTCACTTACAGTCTTTACAAGAAGATTAGGCCTGTGGTCATATTCTTGATGACCAAGGCTGGAGTCACTGATGAAAATATTGGAAAGGTTGTAGCTCTTGGACCTGAGCTCTTAGGATGCAGGATAGTACATAAGCTTGAAGTAAATGTAAAGTATTATTTGTCTCTCGGCATACGTCTTCGGCAACTGGGTGAAATGATTGCTGATTTCCCAATGCTGCTCCGATACAATATAGTTGTTCTTCGTCCTAAGTATACGTATTTGCGCAGAACCATGGTCCGAACTTTGCAAGATGTCATCGAGTTTCCGAGGTTTTTTAGCTATTCTCTTGAGGGTCGAATTATCCCAAGACACAAGGTTCTGGTGGAGAATCAGATTAATGTCAAGCTAAAATGCATGTTAGCTTGCACAGATGAAGAGTTTAACAAAATGGTCAAGGGTATGATTAGAAAACGCCAAAAATTTCAATCTACTGACATGAAAGTGGATACCAAGCGTCCCCAATCTCTCGTTACTGGGAATATTACTACACCCCATACATAA 1188 0.4125 MSRGKLESIRNRVEWLKSVLVKGEFIGDAMLKGGDNVLLRSDRELDEIVEYLESNGVRKEWMGYVVSRCPKLLSYSLEEVKIRVQFFLDMGLDAKDFGTMVFDFPKVLGYYTLEEMNRKVDYLKEFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDLEMTIVPKVKFFQDLGVRNDGIANMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTDENIGKVVALGPELLGCRIVHKLEVNVKYYLSLGIRLRQLGEMIADFPMLLRYNIVVLRPKYTYLRRTMVRTLQDVIEFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDEEFNKMVKGMIRKRQKFQSTDMKVDTKRPQSLVTGNITTPHT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2547 395 Pfam mTERF 49 356 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 Pfam mTERF 7 124 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 Gene3D Transcription termination factor 3, mitochondrial 140 371 IPR038538 -
Mal7g2547 395 PANTHER CGI-12 PROTEIN-RELATED 1 380 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 1 380 - -
Mal7g2547 395 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 279 309 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 206 238 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 63 93 IPR003690 GO:0003690|GO:0006355
Mal7g2547 395 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2547 Mal-Chr7 87086851 87088626 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal7g2547 mTERF 9.7e-67 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2547 K15032 - mnt:21401514 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2547 7 87086851 87088626 Mal7g2547 7 87086851 87088626 ECH