Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2542 ATGTCAGAGTCCACAACCACAACCACAACCACATCATCAACTTCTCTTATGAGTTTTAAGGTACTCATTTTAGCAGGAATATTCCTCATCATCGTGATAATAATCGTGCTTCTAATATTCCTCTGCTTTCGCGGTAGCCGAAAGAAGAGGAATCTGCTGCCGAAGCTGCATAGCTCCGGCAGCACTCCTCTAGTTTCAAAGGAGATATCGATGGTTAAGGAAATTGATCTCACGCGCTCTTCTGAAAAACAGACAAGGATCGAGATTATTGAAGATGATGATCCGAAGAAGGAGGCGGAGATTAAGGTTGAAATTGGAGAGGTAAGGAAAGGTGAAGTGTCATGCGGTGGGGTCTACATGCAGGAGGATCCAAACATTGGGTGGGGTCGGTGGTATAGTTTGAAGGAAGTGGAGATTGCGACACGTGGATTTGCGGAAGGGAATGTGATTGGTGAAGGTGGGTATGGGGTTGTGTATAGAGGTGTTTTGCAAGATGGTTGTGTTGTGGCAGTGAAGAATCTTCACAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGCAAAGTAAGGCATAAGAATTTGGTTCGTTTAGTAGGATATTGTGCAGAAGGCGCTCGAAGGATGCTTGTTTATGAATATGTTGAAAACGGGAATTTGGAGCAATGGCTGCATGGTAATGTAGGACCAGTTAGCCCCTTGACATGGGATATTCGAATGAAGATTGCAGTTGGAACTGCGAAAGGGCTAACCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGACATAAAATCAAGTAACATCCTTTTGGACAAAAATTGGAATGCCAAAGTTTCAGATTTTGGACTTGCCAAGCTCTTGGGATCTGAGAAAACTCATGTAACCACGCGTGTGATGGGAACATTTGGATATGTTTCTCCTGAGTACGCAAGCACAGGTATGCTTAACGAGCGTAGCGATGTTTATAGTTTTGGAATTCTACTCATGGAGATAATCACAGGAAGAAGCCCTGTTGATTATTCAAAACCACCTGGAGAGATGAATTTGGTTGATTGGTTTAAGGCAATGGTAGCAAGTCGTCGCAGCGACGAGCTAGTCGATCCTTTAATTGAGATTCCACCTTCTCCAAGATCTCTGAAGCGAGTTTTGCTGATTTGCCTACGCTGTATAGACTTGGATGTTATCAAGCGCCCGAAGATGGGTCAAATTGTTCATATGCTTGAGTCCGACGATTTCCCTTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTCTGTACCTTCTCAAGCAGATGTTTATATCAAAGTTCCCTATCAACGAAAACATGCAGAACCTGCAGAAAAATCAATGCCTAGATGA 1386 0.4351 MSESTTTTTTTSSTSLMSFKVLILAGIFLIIVIIIVLLIFLCFRGSRKKRNLLPKLHSSGSTPLVSKEISMVKEIDLTRSSEKQTRIEIIEDDDPKKEAEIKVEIGEVRKGEVSCGGVYMQEDPNIGWGRWYSLKEVEIATRGFAEGNVIGEGGYGVVYRGVLQDGCVVAVKNLHNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVENGNLEQWLHGNVGPVSPLTWDIRMKIAVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGILLMEIITGRSPVDYSKPPGEMNLVDWFKAMVASRRSDELVDPLIEIPPSPRSLKRVLLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDSVPSQADVYIKVPYQRKHAEPAEKSMPR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2542 461 CDD STKc_IRAK 150 416 - -
Mal7g2542 461 PANTHER RECEPTOR-LIKE KINASE 10 458 - -
Mal7g2542 461 ProSiteProfiles Protein kinase domain profile. 144 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2542 461 Pfam Protein kinase domain 146 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2542 461 Gene3D Transferase(Phosphotransferase) domain 1 220 428 - -
Mal7g2542 461 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Mal7g2542 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Mal7g2542 461 SMART serkin_6 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2542 461 SUPERFAMILY Protein kinase-like (PK-like) 127 416 IPR011009 -
Mal7g2542 461 PIRSF TyrPK_CSF1-R 1 51 - -
Mal7g2542 461 PIRSF TyrPK_CSF1-R 234 418 - -
Mal7g2542 461 PIRSF TyrPK_CSF1-R 143 236 - -
Mal7g2542 461 Gene3D Phosphorylase Kinase; domain 1 118 219 - -
Mal7g2542 461 PANTHER OS01G0323000 PROTEIN 10 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2542 Mal-Chr7 86991366 86996842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2542 94 416 Receptor kinase-like Gene Family AT4G02010 46.789 5.25e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mal7g2542 Pkinase 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2542 - - lang:109351508 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2542 7 86991366 86996842 Mal7g2542 7 86991366 86996842 ECH