Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2504 ATGGAGAGAGCATTTGATTCATTGTCTGATGTTGTTCCTGGAAGGGATACATGGAGGATAAAGGTTCAGTCATGTGTGAGTGAGTTCATTCCAATGTATGGATTAAGCTTTACTGATATTGCCCAAGTGTGCAGCCACACTGTTGATTATGAACACTTAGTTGATGTTATAGGGATGATCACTGGGATATCTGAGGAGAGGGAATATATTAGGGATTCTGCAATCACCAAGATGGTTATCATTGAAATAACTGATCAAAGTGGGAAGGTTGAATGTGCACTCTTTGGTGAATGTGTGGAGGTTCTGAAAAAAATGATGGAGTCATCTTCTGAAGGGCTTCCTGTCATTGTTGTTCAGTTTGCGAAGATTAAGTTTTTCATGGATAAGGTGTCAATTCAGAATGTTAAGAGTACAACTAGGATTTTGCTGAATCCAGATATTCCTCAGGTTGCTGGGTTGAAAAAGGGGATCTCTGAACTTGGTGTTGAGTCTGCTTCATCTGTTACTAAACTGGGTTCACGTTCAAAGCCATCGTTTGATGAAGAATTTCTGCGTATGTTTCCTAAGAAGAGTATTGTACAGCTGAATGACTCAGCTGAGGATGGAAATTTTGTTGTAAGTGCAATTGTGACTGCATTTGTTGAAGGAGAAGAATGGTGGTATCCTGCTTGTAAGTGTCATAGGAGTGTCACTGCAGATTCTGGTGTTTATTATTGCAAAGGATGCGTTAAGCATGTTTTTCAAATGGTTCCTAGGTATAAAGTTAAGGTGATTGTTGAAGATGGTACTGGGGAAGCAGTGTTTGTTCTATTTGATAATGATGTTCATTATCTTCTGGAGAAACCATGCAAAACTCTGGTGTCAAACTCTAATGCTGAAAATGCTGGGTTTTATCCACCTGAACTCATACTGTTGAAGGGTAGTAGAATTCTCTTTAAGGTTGTAAAGTCTTCTGTTGCAAGCTCTCTTTTTGAGGGATCTTACAGGGTCAAGCGTGTTTGTAAAGAACAATCTATCATTGATAGTTTTGCAAGTGATGGTGTTGAATACACACCTACTAAGTCCATAGCATGTGACAAAGAAAGTTTTGGTGCTGCTGTGGATAATGATATTGACTATGTTGCTACTTCTGTAAACATATCCGATGATGCTGTTAACCTTGGTGATGATGCTGATTATGTTGATGAAACTCAAGTTGATAACCTTGCTGAAGGAGCTGATGAGAGTTCTACTAAGCGTAATCTCACAGCATCATTTGATGTTGTTACTGGGACTAGATCTAACAGAAGATTGAAGAAGATTAAAGTTGAAAATGATTGA 1320 0.3864 MERAFDSLSDVVPGRDTWRIKVQSCVSEFIPMYGLSFTDIAQVCSHTVDYEHLVDVIGMITGISEEREYIRDSAITKMVIIEITDQSGKVECALFGECVEVLKKMMESSSEGLPVIVVQFAKIKFFMDKVSIQNVKSTTRILLNPDIPQVAGLKKGISELGVESASSVTKLGSRSKPSFDEEFLRMFPKKSIVQLNDSAEDGNFVVSAIVTAFVEGEEWWYPACKCHRSVTADSGVYYCKGCVKHVFQMVPRYKVKVIVEDGTGEAVFVLFDNDVHYLLEKPCKTLVSNSNAENAGFYPPELILLKGSRILFKVVKSSVASSLFEGSYRVKRVCKEQSIIDSFASDGVEYTPTKSIACDKESFGAAVDNDIDYVATSVNISDDAVNLGDDADYVDETQVDNLAEGADESSTKRNLTASFDVVTGTRSNRRLKKIKVEND* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2504 439 SUPERFAMILY Nucleic acid-binding proteins 194 314 IPR012340 -
Mal7g2504 439 Gene3D - 178 341 IPR012340 -
Mal7g2504 439 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 13 287 - -
Mal7g2504 439 PANTHER REPLICATION FACTOR A 1, RFA1 13 287 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g2504 439 SUPERFAMILY Nucleic acid-binding proteins 35 156 IPR012340 -
Mal7g2504 439 CDD RPA1_DBD_C 189 314 IPR013955 -
Mal7g2504 439 Pfam Replication factor-A C terminal domain 206 296 IPR013955 -
Mal7g2504 439 Gene3D - 30 166 IPR012340 -
Mal7g2504 439 CDD RPA1_DBD_B_like 55 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2504 Mal-Chr7 85930086 85932556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2504 29 279 Core DNA Replication Machinery Family AT5G08020 25.856 3.95e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2504 - - mtr:MTR_8g062030 465.692