Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2497 ATGGACGATTACGCTACCAGCGATGAAGATTATCAATACTCCGATCAGGAAGTTGAAGAGGAAGATTCCGTCGGTGAATTCTACGACAACGCTGACGACTCCAATTTTCACCTCCCCTCTTCTGAGGGTCCTAGTGCTCAGGTGATTACGAAGGAATCACTGATAGTTGCACAGAAGGAGGACTTGCGCAGAGTGATGGACATGCTTTCTGTAAGACAACAGCATGCACGCATAATGCTTATTTATTATCGTTGGGATGTGGAAAAGTTGTTTGAAGTTTATGTAGAAAAAGGGAAGCCGTTTATGTTTGCTCAGGCTGGTGTTAGTGTGGATGAATATCGTGACTCTGACTCACTGGATATTGCTTTAGTAATGTGTGAAATCTGCATGGATGACATTCCTGGTGATGAAGTAACGAGAATGGACTGTGGTCACTGCTTTTGCAATACCTGTTGGACACAACATTTTTTTGTCAAGGTAAATGAGGGTCAAAGTAAACGCATCAGATGCATGGCTCACAAATGTAATTCAATTTGTGATGAAGCTGTCGTAAGAACTCTACTCGGTAAAGAGCACCCTGATATGGCAGAGAAATATGAGCGCTTTCTTCTTGAATCCTACATTGAAGACAATAAGAGAGTTAAATGGTGTCCGAGCACGCCACATTGTGGAAACGCAATTCGTGTTGTGTGTGATGACTTGTGTGAGGTAGAATGTTCTTGCGGTGAGCAGTTTTGTTTTAATTGCTTGTCAGAAGCACACTCCCCCTGTTCATGTTTGATGTGGGAGCTCTGGGAAAAGAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAACTGTTCATACAAAATCTTGTCCGAAGTGCCACAAACCGGTGGAGAAGAATGGTGGTTGTAATTTGGTTAGCTGTATTTGCGGCCAAGCATTTTGTTGGTTGTGTGGTGGAGCTACTGGCCGGGAACATACTTGGTCAAGTATAGCTGGTCACAGCTGTGGTCGCTACAAAGAACAAGAGAAAACAGCTGAGCGGGCAAAGAGGGATCTCTATAGGTACATGCATTATCATAACCGATATAAAGCACACACAGACTCCTTTAAGCTTGAAAGTAAACTGAAAGATATCATACAAGGGAAGATTTCTATTACAGAAGAAAAGCATTCTGAACGAAAAAAATCTGAACTCAGAGATTATAGCTGGGTAAATAATGGGCTCTTGAGGCTCTTCAGATCTAGACGCGTCCTTTCATATTCATATGCATTTGCCTTTTATATGTTTGGAGATGAGCTTTTTAAAGAACAAATGTCAGAAGCCCAAAGGGAAATGAGACAGAACTTATTTGAGGATCAACAGCAGCAGTTAGAGGGAAATGTTGAAAAACTCTCTAAGATTTTGGAGGAGCCTTTCGAAACCTTTAAATATGCTAAGCTTATGGAGATTAGGATGCAGATACTAACTCTGTCGACACTTATTGATGATCTCTGTAAAAAAATGTATGAGTGCATCGACAATGATCTATTGGGTTCTATTAATCTTGGTAGTATCCACACTATAGCACCATATAAATCAAAGGGAATAGAGAGGGCTTCAGAGCTTCCTGTTGGTTGGAGCAATAAAGCCAACAATACGGGTGTAACAGCAGAGCTTAATCAGTCAGATGAGAGTGGATGTTCTTCCCGTAAGCGTGCCAGAAAAGGTGGCTTTTTTGATCTAAACTTGCCAGCTGAGGTTGTAGACAGAAATTGA 1746 0.4141 MDDYATSDEDYQYSDQEVEEEDSVGEFYDNADDSNFHLPSSEGPSAQVITKESLIVAQKEDLRRVMDMLSVRQQHARIMLIYYRWDVEKLFEVYVEKGKPFMFAQAGVSVDEYRDSDSLDIALVMCEICMDDIPGDEVTRMDCGHCFCNTCWTQHFFVKVNEGQSKRIRCMAHKCNSICDEAVVRTLLGKEHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRVVCDDLCEVECSCGEQFCFNCLSEAHSPCSCLMWELWEKKCRDESETVNWITVHTKSCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKEQEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKDIIQGKISITEEKHSERKKSELRDYSWVNNGLLRLFRSRRVLSYSYAFAFYMFGDELFKEQMSEAQREMRQNLFEDQQQQLEGNVEKLSKILEEPFETFKYAKLMEIRMQILTLSTLIDDLCKKMYECIDNDLLGSINLGSIHTIAPYKSKGIERASELPVGWSNKANNTGVTAELNQSDESGCSSRKRARKGGFFDLNLPAEVVDRN* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2497 581 Pfam Ariadne domain 336 581 IPR045840 -
Mal7g2497 581 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 211 IPR013083 -
Mal7g2497 581 SUPERFAMILY RING/U-box 266 324 - -
Mal7g2497 581 Gene3D - 255 507 - -
Mal7g2497 581 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 5 523 IPR031127 GO:0004842|GO:0016567
Mal7g2497 581 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g2497 581 SMART ibrneu5 197 259 IPR002867 -
Mal7g2497 581 SMART ibrneu5 267 332 IPR002867 -
Mal7g2497 581 ProSiteProfiles Zinc finger RING-type profile. 126 174 IPR001841 -
Mal7g2497 581 Pfam IBR domain, a half RING-finger domain 197 259 IPR002867 -
Mal7g2497 581 ProSiteProfiles TRIAD supradomain profile. 122 336 IPR044066 -
Mal7g2497 581 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 5 523 - -
Mal7g2497 581 SUPERFAMILY RING/U-box 123 209 - -
Mal7g2497 581 SUPERFAMILY RING/U-box 197 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2497 Mal-Chr7 85839101 85842898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2497 66 560 ARIADNE family AT2G16090 66.733 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2497 K11968 - gmx:100783343 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2497 7 85839101 85842898 Mal7g2497 7 85839101 85842898 ECH