Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2459 ATGCCTTGTCCTTCATTTCACAAGCTTGTTCTACCTTCCACTCTCCAAGCTAAGAAACTGAGGCTACCAGATGGTTTTATGAAGAAATATGGCGGTGATATTTCTCCGATTGTTACTCTCACAGTTCCTGATGGCAGCGTATGGCGTGTAGGATTGAAAAAGGCAGACAACAAATTCTGGTTCCTCAATGGTTGGGATGAATTTGTTCAAAACTATTCCATTGGTACTGGGTACTTGTTGTTATTCAAATACGAAGGAAAGTCGTCTTTCAATGTTAATATTTTTAGTTTGGCTACTACTGAGATAAACTATAAATCACCCGCACAAAGCAGTAACGAAGGGTCTCTCTTTGCAAAACATCTTAAAATTTTCGAAGAAATGGAAGATGAAGATTCCATTGAAATCCTGGATTCGTCTCCTACAAATCCTACTCCTGGACCATTGGAAAACAAAGCTGTTGCTGGATCAGCTGATAAATTCACGCCTGGAAAATCTCGTTCGCCTCCAGCTCTGCAGAATCTGTTTAATGGATCTAAACTTAATAGCATAAACTGGGGAGAAGGTGGGAATTCTCCTTTCAAAAGTGCCAATTCGTTAGACAACCAGTTGACCAGAGATATAGGTCTCCAGTTTAATGTAGTCGAGTTTAAAAAGTCTAATGAAGAGTTGAAGGTGCGTGCAGCTACTGATGAAAAGGTTAAGAAAACTGCTGTGAAGAAGCGGAAATCAGATGTCCAAGAACCTCCTTCTGAACATGAAGATGAGGTAGAAATGCGCAATAGGTTTTACGAAAGTGCATCCGCAAGGAAAAGAACTGTGACAGCTGAAGAAAGAGAGAAGGCCATCAATGCAGCAAAAGCATTTGAGCCATCTAATCCTTTCTGTCGGGTCGTCCTGCGACCCTCCTATTTATATCGGGGGTGCATAATGTATCTACCATCTTGCTTTGCAGAGAAGAATCTGAACGGTGTTTCAGGAATTATCAAACTTCAAATCTCTGATGGGAGACAGTGGCCAGTTCGCTGCCTTTATAGAGGTGGTCGAGCTAAGTTAAGCCAGGGGTGGTTTGAGTTTTCGCAGGAGAACAATTTAGGAGAAGGTGATGTGTGTGTGTTTGAGCTGGTTGCAACGAAGGAGGTAGTGCTGCAAGTTACTGTATTTCGTATTACCGAGGATGAAGGACCGTTGAGCCCACCGCCTTTGCAGCAGAGCCAACATGTGAACCCGGTGAAACTGGTAAACGTTCCGTTTCAGCATCACCTCGCTTCAACTAAACTGATTAGAAATTAA 1290 0.4248 MPCPSFHKLVLPSTLQAKKLRLPDGFMKKYGGDISPIVTLTVPDGSVWRVGLKKADNKFWFLNGWDEFVQNYSIGTGYLLLFKYEGKSSFNVNIFSLATTEINYKSPAQSSNEGSLFAKHLKIFEEMEDEDSIEILDSSPTNPTPGPLENKAVAGSADKFTPGKSRSPPALQNLFNGSKLNSINWGEGGNSPFKSANSLDNQLTRDIGLQFNVVEFKKSNEELKVRAATDEKVKKTAVKKRKSDVQEPPSEHEDEVEMRNRFYESASARKRTVTAEEREKAINAAKAFEPSNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGIIKLQISDGRQWPVRCLYRGGRAKLSQGWFEFSQENNLGEGDVCVFELVATKEVVLQVTVFRITEDEGPLSPPPLQQSQHVNPVKLVNVPFQHHLASTKLIRN* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2459 429 Gene3D - 272 392 IPR015300 -
Mal7g2459 429 ProSiteProfiles B3 DNA-binding domain profile. 295 390 IPR003340 GO:0003677
Mal7g2459 429 SUPERFAMILY DNA-binding pseudobarrel domain 288 389 IPR015300 -
Mal7g2459 429 PANTHER B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN 1 419 - -
Mal7g2459 429 CDD B3_DNA 293 388 IPR003340 GO:0003677
Mal7g2459 429 PANTHER B3 DOMAIN-CONTAINING 1 419 - -
Mal7g2459 429 Pfam B3 DNA binding domain 8 96 IPR003340 GO:0003677
Mal7g2459 429 Pfam B3 DNA binding domain 298 388 IPR003340 GO:0003677
Mal7g2459 429 MobiDBLite consensus disorder prediction 137 172 - -
Mal7g2459 429 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Mal7g2459 429 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Mal7g2459 429 Gene3D - 2 98 IPR015300 -
Mal7g2459 429 CDD B3_DNA 4 96 IPR003340 GO:0003677
Mal7g2459 429 SMART B3_2 295 390 IPR003340 GO:0003677
Mal7g2459 429 SMART B3_2 6 98 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2459 Mal-Chr7 85324927 85327559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2459 1 394 B3 DNA Binding Superfamily AT3G18990 50.125 1.16e-125 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal7g2459 B3 2e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2459 - - gmx:100813285 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2459 7 85324927 85327559 Mal7g2459 7 85324927 85327559 ECH