Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2444 ATGGAAGACCAATTTTCATCAAAGGAGAAAGGAATCAGCCTTTGGACACCATTGGATAGTGGAATGAAAAGTTCATCAACTTCAGATGACATGTTTAGCAACATGTCTGAGCTAATGAATTTTGATAACTATGCTGGTTGGTGCAATGGTTCATCATCAATAACTGATCAAACTTTAACTAATGATCTTTCATCATTTGCATATTCACCACATGATGGATTGAATTTAGCTGAACACGTTAATGGTCCATTTTTTATGACAGAAATTGGTGGAAATTACAATGTTTTGGATAATTCCATTAGTTATGATGAAAAAGTACTATTACAACAAATGGAAACTCAATTTGAGTTCTTAGATAATAATTCAAATGAAACAAATAATAATTTAGATTCACAACAAGAACAACAAAATGGTTCTTTTGATATGTGCAATTACATAATACCAAAGTCACCTAGTTGGTCACTTGATGAGAGAATGATGAGTGCTTTATCATCCTTTAAGGAATCGGCTGGTGGAGGAATACTAGCACAAGTTTGGGTACCTATAAAGTATGGTGATGACTTCATCTTAACTACAAGTGATCAACCATATTTGTTAGACCAAAAGCTTGCAGGGTACCGCGAAGTGTCGAGGTCGTTTACGTTTTCTGCAGAAATGAAAACGGGATCTTGTTGTCCTGGACTTCCCGGTCGCGTGTTTAACTCGCATGTTCCTGAATGGACCTCTAATGTTGGTTATTATAATAAATCTGAGTACTTGAGATTAGATCATGCAATTAGTCACGAGGTTCGCGGATCGATTGCTCTTCCTATATCTGATATGCACTCTGAAGTTTCATGTAGTGCTGTACTTGAACTTGTCACTACAAAGGAAAAGCCTAATTTTGACAAAGAATTAGAATTTGTTTCTCATGCACTTCAGCGTGTGAATCTAAGGACTATTATGCCTCCACGACTTCTTCCACAGTGTGTGTCAAATAACAAAAGAGCTGCATTAACAGAGATAACTGATGTGTTAAGAGCTGTTTGTCATGCACATAGTTTACCACTAGCACTGACATGGATTCCATGTTGTTATAGTGAAGGAAAAGGCGAAGAATCTGAGCGAATACGAGTTAAAGAAGGCCATACAACAAGTCCTGATGAAAAATGTGTACTATGCATTGAAGAGTCAGCTTGCTATATCAATGATAAAATGGTAGGAGGATTTGTGCATGCATGTTCTGAACATCATCTTGAGGAAGGACATGGTATATCAGGGAAAGCTCTTCAATCAAATCATCCATTCTTCTATACCGATGTGAAGGCTTATGATGTTAGCGAATATCCGCTTGTTCATCATGCGCGAAAATATAACTTGAATGCTGCAGTTGCAATTAGGCTAAGGAGTACTTATACTAATGATGATGATTATGTGTTAGAATTCTTTCTTCCTATCAATATGATAGGGAGTTCAGAACAGCAACTTTTATTAGACAATTTGTCGGATACTATGAGGAGAATTTGTAAGAGTTTGAGGACAGTTTCAGAAGCTGAACTAAGAGGGATAGAAGGTTATCAATATGAGTTTCAAAAGGAAAATGTCTCAGGTTTTTTTCCTATGTCTAGGGGGAACACACAGATAGCATTTAGTAGCGGTGACCATGATTTATTCCAGATGTCATTCAACCAAACTAACCTAAAAAATTGTGGAAATCAAGCTGCTCATAGTCAGGCAACAAGTGGATCAAGAAAACAGGCTGAGAAAAAGAGAAGTGCAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAGGATGCTGCAAAAAAAATTGGGGTTTGTCCAACAACGCTGAAGAGGATATGCCGGCAACATGGAATTTCGAGATGGCCATCACGTAAGATAAATAAAGTGAATCGTTCGTTGAAGAAAATACAAACTGTCCTTGATTCTGTCCAAGGAGTGGAAGGAGTTCTCAAGTTTGACCCTCACACTGGTGGATTTGTTTCTGGAGGATCAATCATCCAACAAATTGGTACACATAATAAAACTCTCATGTTCCCTGAGAAAATTTCAGTAGAGAACTCGGCCATTAAGTTGGAGGATGATGGTGTTCTTATCTCTAATTCATGTGAAGGTGAATTGAAGAAAGACAATGCTTCTTTTGTTGACTGTATTCAAGATTCAACATCATGGCTTTGGACAAAGACTCAGGATTGTCCTAAACAAACTTCTATAGATTCTGTTCTTGAAAAAGAGGAAGATCAATGTGGTTTGAACAATAGTAGTTTGCATGATATTGCCTCTCTTAGTTCATTCTCATTGACTGAACTGTGCGTGGATGAGGGAAAAGGACTTGATGAACATAACCACCCTACTTCTTCAAGCATGACTGATTCATCGAATGCTTCTGGCTCAATGGTGCATGGAAGTTCATCAGGATCCCAAAGCATTGAGAATCAGAAGCACTCAAAAATCAAATCAATCTGCGTCGATAGTGAATCGAAATTCGCTGTCAAAGCTAGCTATAGAGGAGATACTATTCGTTTCAAGTTCGATCCATGTGTAGGTTGTTTTCAACTATATGAAGAAGTTGCAAAAAGGTTCAAGTTACAAAATGGTTCTTTCCAACTCAAGTATCTTGATGATGAGGAGGAATGGGTGATGTTGGTGAATGACTCAGATTTGAAAGAATGTGTAGAAGTTTTGAGCGATATTGGTACACATTGTGTGAAGTTACTTGTTCGCGATATACATGGCGGCAGTGACAGTTGA 2775 0.3773 MEDQFSSKEKGISLWTPLDSGMKSSSTSDDMFSNMSELMNFDNYAGWCNGSSSITDQTLTNDLSSFAYSPHDGLNLAEHVNGPFFMTEIGGNYNVLDNSISYDEKVLLQQMETQFEFLDNNSNETNNNLDSQQEQQNGSFDMCNYIIPKSPSWSLDERMMSALSSFKESAGGGILAQVWVPIKYGDDFILTTSDQPYLLDQKLAGYREVSRSFTFSAEMKTGSCCPGLPGRVFNSHVPEWTSNVGYYNKSEYLRLDHAISHEVRGSIALPISDMHSEVSCSAVLELVTTKEKPNFDKELEFVSHALQRVNLRTIMPPRLLPQCVSNNKRAALTEITDVLRAVCHAHSLPLALTWIPCCYSEGKGEESERIRVKEGHTTSPDEKCVLCIEESACYINDKMVGGFVHACSEHHLEEGHGISGKALQSNHPFFYTDVKAYDVSEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYVLEFFLPINMIGSSEQQLLLDNLSDTMRRICKSLRTVSEAELRGIEGYQYEFQKENVSGFFPMSRGNTQIAFSSGDHDLFQMSFNQTNLKNCGNQAAHSQATSGSRKQAEKKRSAVEKNVSLSVLQQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGVLKFDPHTGGFVSGGSIIQQIGTHNKTLMFPEKISVENSAIKLEDDGVLISNSCEGELKKDNASFVDCIQDSTSWLWTKTQDCPKQTSIDSVLEKEEDQCGLNNSSLHDIASLSSFSLTELCVDEGKGLDEHNHPTSSSMTDSSNASGSMVHGSSSGSQSIENQKHSKIKSICVDSESKFAVKASYRGDTIRFKFDPCVGCFQLYEEVAKRFKLQNGSFQLKYLDDEEEWVMLVNDSDLKECVEVLSDIGTHCVKLLVRDIHGGSDS* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2444 924 SMART PB1_new 836 918 IPR000270 GO:0005515
Mal7g2444 924 PANTHER PROTEIN NLP8 15 918 IPR045012 GO:0003700
Mal7g2444 924 SUPERFAMILY CAD & PB1 domains 832 920 - -
Mal7g2444 924 ProSiteProfiles PB1 domain profile. 836 918 IPR000270 GO:0005515
Mal7g2444 924 MobiDBLite consensus disorder prediction 786 821 - -
Mal7g2444 924 CDD PB1_NLP 837 917 IPR034891 -
Mal7g2444 924 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 15 918 - -
Mal7g2444 924 MobiDBLite consensus disorder prediction 790 821 - -
Mal7g2444 924 Pfam PB1 domain 837 917 IPR000270 GO:0005515
Mal7g2444 924 MobiDBLite consensus disorder prediction 566 585 - -
Mal7g2444 924 Gene3D - 832 915 - -
Mal7g2444 924 Pfam RWP-RK domain 590 638 IPR003035 -
Mal7g2444 924 Coils Coil 108 135 - -
Mal7g2444 924 ProSiteProfiles RWP-RK domain profile. 570 658 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2444 Mal-Chr7 84981646 84985497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2444 1 918 NLP Transcription Factor Family AT2G43500 49.174 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal7g2444 PB1 2.6e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2444 - - aprc:113864503 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0435 4 3759858 3765969 Mal7g2444 7 84981646 84985497 PCT