LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g2437	ATGAGAGAAAGTTTTGTTGCAAGATACAAAGCCATTATGGAAGAACAACATGAGAAACCCCCTTTCGATGCTAACTATATGCCTGGTTTGAAAAAAATATTATCAAAAATTGCACCAGAGTTCTATACCCAAGAAGAGTTGACAGAAATAGAGAAAGTCGACCAAAGTAATAACTCAGAACTAGAATCAATTTTCACTTCACAAGTGATGAAGGCATCACCTCGGAAAGAAGAGATCGCGAATATGAAAAAAAGAGAGCACTCAAGTGATGAAGGCAGCACCTCGGAAAGAAGAGTGGAACCAAAGAAAAAGAAGAAGGAACCAAATCAACATGGTAATGCAATAGTACCACCACCTCCGCCACCACTGCCAAAATTGCCTATTCATGTAAGGAACATGATCGCAGATTTGAATGGTAGTGATATCAGATATGTCATGTGTAAGAAGTTGTTCCCGACAGATTTTAGCGAAGGTAACAATCGTCTTTCAATGCCACGTGCAGAAATCTTTCTAACTAAGATAGAGGAGGAAGTATTAGATACAAGGGATGAAAATAACAAACCTAATGGTTTGGAAGTGGTTGTTTTGGACCCTAACTTTAAAGAGTACACCATGTTCTTGAAGAAGTGGAACAATGTTTACAGTCTTACGAAACATTGGAATGATCTTTGGAAGGAAAACAATTGGACCAAAGACAATAAACTCTACCATGAACTCCACATATGGTCTTTTAGGGTCGATGGCATGTTGCACTTCACGCTCAACAATAAGATTCCTAATGTTTAA	786	0.3817	MRESFVARYKAIMEEQHEKPPFDANYMPGLKKILSKIAPEFYTQEELTEIEKVDQSNNSELESIFTSQVMKASPRKEEIANMKKREHSSDEGSTSERRVEPKKKKKEPNQHGNAIVPPPPPPLPKLPIHVRNMIADLNGSDIRYVMCKKLFPTDFSEGNNRLSMPRAEIFLTKIEEEVLDTRDENNKPNGLEVVVLDPNFKEYTMFLKKWNNVYSLTKHWNDLWKENNWTKDNKLYHELHIWSFRVDGMLHFTLNNKIPNV*	262

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g2437	261	Pfam	B3 domain-containing protein At2g31720-like	130	223	IPR005508	GO:0003677
	Mal7g2437	261	MobiDBLite	consensus disorder prediction	53	124	-	-
	Mal7g2437	261	Gene3D	-	136	248	IPR015300	-
	Mal7g2437	261	PANTHER	DUF313 DOMAIN PROTEIN	30	256	-	-
	Mal7g2437	261	PANTHER	B3 DOMAIN PLANT PROTEIN-RELATED	30	256	IPR005508	GO:0003677
	Mal7g2437	261	MobiDBLite	consensus disorder prediction	76	110	-	-
	Mal7g2437	261	SUPERFAMILY	DNA-binding pseudobarrel domain	144	228	IPR015300	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g2437	Mal-Chr7	84895921	84896706	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g2437	130	254	B3 DNA Binding Superfamily	AT1G05930	26.923	5.12e-11	60.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g2437	-		-	mtr:MTR_4g068060	183.726

Showing 1 to 1 of 1 entries