Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2427 ATGAAAATTCAGTGTGATGTGTGTGAGAAAGCTCCTGCTACGGTGATTTGTTGTGCTGATGAAGCTGCTTTGTGTGCTAAATGTGATGTTGAAGTTCATGCTGCTAACAAGCTTGCTAGCAAGCATCAAAGGCTTCTTCTTCAATGTCTTTCTAACAAGCTTCCTAAATGTGATATCTGCCAAGATAAGCCAGCTTTCATATTTTGTGTTGAAGACAGAGCACTGTTCTGTAAGGACTGTGATGAACCAATTCATGTAGCTGGTAGTCTTTCTGCAAACCACCAGCGCTTCCTTGCTACCGGTATCCGTGTGGCTTTGGCTTCTAGTTGCACCAAAGACAATGAGAAAAGCCAAGTTGAACCATCTAATCCAGACACTCAACAAGTTCCCGTCAAAGTTTCTCCTCCTCAGGAAGTGCCTAGTTTTGCATCCTCTTGGGCTGTTGATGATTTCTTGGAATTAACAGCCTTTGATTCACCAGACAAGAAGCAGTCCATGGAGTTTGGAGAGTTTGAATGGCTATCGGACACAGGTCTTTTCAACGACCAGTTTCCTCAGGAAGGTTTAGCTGCAGCTGAAGTTCCTCAACTTCCGGTAATGCATGCTAGCGGCATTTCTCCTTACAAAGCCTCTAAATACTATATGTCTTACAAAAAGCCTAGGATTGAAGTCCGACATGAAGACGATGATGATGATGAGCACTTCATGGTGCCTGATCTCGGTTGA 726 0.4366 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPKCDICQDKPAFIFCVEDRALFCKDCDEPIHVAGSLSANHQRFLATGIRVALASSCTKDNEKSQVEPSNPDTQQVPVKVSPPQEVPSFASSWAVDDFLELTAFDSPDKKQSMEFGEFEWLSDTGLFNDQFPQEGLAAAEVPQLPVMHASGISPYKASKYYMSYKKPRIEVRHEDDDDDEHFMVPDLG* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2427 241 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Mal7g2427 241 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Mal7g2427 241 SMART bboxneu5 52 99 IPR000315 GO:0008270
Mal7g2427 241 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mal7g2427 241 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mal7g2427 241 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 241 - -
Mal7g2427 241 Gene3D Classic Zinc Finger 1 95 - -
Mal7g2427 241 CDD Bbox1_BBX-like 5 47 - -
Mal7g2427 241 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 241 - -
Mal7g2427 241 CDD Bbox1_BBX-like 56 98 - -
Mal7g2427 241 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Mal7g2427 241 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2427 Mal-Chr7 84777460 84779564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2427 1 162 Orphan Transcription Factor Family AT1G06040 66.071 5.57e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mal7g2427 zf-B_box 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2427 - - gmx:100779183 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0450 4 3937302 3939040 Mal7g2427 7 84777460 84779564 PCT