Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2412 ATGTATCCCAAAGATGATCCTGATTCCAGGCCAGTGCGCACAAGTGATAGGATCAAGACGAGGCCACCAGTTTATAACCGCGCACCATTCTTGTATTACAACTCAAATCTTAGGCGCCCCAGGAAAAGCAAGAATAAGACAAGAACAGCAGCTTCACAGATCGCTAAAATGTTGCGTCCAGGGAATCGGAAAGCACGCGATTCGAATAATAATTCTGGCTCTGCCAACCTTCGGCGCTCAACCAGGGAGAGAAGGGTTAATGTAAATCTTATGGAGTTCGCAGACAGCTCTGGATCTGAGGATGCCGATTTAATGAGACCCTCATATCGACCAATGAGAAACCGAAGCAACAGTGTCAGCCGGGATGATGCAATATCTTCTAAGCGCAAAAGAGCAGTGGATACTAAACCAACTCCTCGACGTGAAGGTCTACGGCCTCGTCGATCGAAGGCTGCTGGTAGAGAAAGATTAATATTAGAATCAGATGATGATCAAGACCTTTCAGAGGAGAAGGTTGAGCAAGATGAAACAGAAAATGGAAATGATGTTGAGGAAAATGATGCAGAAGATGGTCATAATGAGATGGAGGGGGATGCCGAGGGTGAAGATGAAGGTGAGGATGAAGGTGATGAGGATGGCGACGAAGAGGGTGATGATGAAGACGGTGAAGAAGAACAGGACGGAAGAAGGCGCTATGATCTTCGAAATCGTGCAGATGTCCGCAGGTTTTCTATGGAGGAAGGGAAGGCACGACCAAGGTCTCCACGAAGAGTGTTACATCAAGGTATGGGAACTAAGGTCAGCAGGGATGTAAGGAAGGGTGGATCACGAGTTCACAAGCGCCATCGCTTAACAAGGCCTGAAGATTCTGATGACTCCCTTCTTGTGGATGAGTTGGACCAAGGCCCTGCTATTCCATGGGGTCGAGGTGGAAACAGATCTGGCCCACCTTTTCTTTTTGGAGGCGTAGACACACATGGAACAACAGCTTGGGGATTAAACCTTGCTGCATCAGGTTGGGGTCATCAAGGGGATGCTTTTGCCACTCTAACTTCAGGGATTCAAACTGCTGGTCCAAGCTCTAAGGGAGGGGCAGATATCCAACCATTGCAGATTGATGATAGTGTAAGTTTTGATGATATAGGTGGGCTCTCTGAATATATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTTTTTGCAAGTTACCACATAACTCCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACGGGGAAAACATTGATTGCAAGAGCTTTGGCTTGTGCTGCTTCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCAGACGTGCTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAACTGAAACTTCTTTTCGAGGAAGCACAAAGGAATCAACCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGATCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGGCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCCACCAACAGGATTGATGCTATTGATGGAGCCTTGCGACGTCCTGGCAGATTTGATCGTGAATTTAACTTTCCCTTGCCTGGTGGTGAGGCACGTGCTGAAATATTAGACATTCATACTCGTAAGTGGAAGCACCCTCCTCCAGAGGAACTCAAAAAGGAACTTGCAGCTAGTTGTGTAGGTTATTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAAGCGGCTATTCGTGCTTTCCGTCAAAAATATCCACAGGTTTATACAAGTGATGACAAATTTCTAATTGATGTTGATTCTATCAAGGTAGAAAAGTATCACTTTATTGAAGCGATGTCTACAATTACGCCTGCTGCTCATAGAGGAGCTATTGTGCACTCTAGGCCATTGTCTCTAGTAGTTCAACCATGTCTTCAGAGACATCTAGAGAAAGTCATGGGTACTATATCTGATATTATTCCTCCAGTATCTGTTGCATCAGAATTGACCAAACTTTCAATGCTTTCGTATGGGTCTGCAATTCCACTTGTATATCGACCTAGGCTTCTACTTTGTGGTGGTGAAGGCACAGGACTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTGCATTCATTAGGACTTCCATCTCTTCTGTCAGATCCTAGTGCAAAGACACCGGAGGAGGCGTTGGTACATATATTTGGTGAAGCTAGAAGAACAACACCATCAATTCTTTATTTACCACAGTTTGATGTTTGGTGGGAAACTGCTCATGAACAGCTCAGAGCTGTTCTCCTAACTATGCTAGAAGAATTGCCATCTGACTTGCCTATCTTACTTCTTGGTACATCCTCAGCTGCACTTGCTGATGTTGAGGAAGTGCCTACTTCAGTTTTCCCTCAACGCTCAGTTTATCAAGTGAACATGCCATCTACCGAAGATAGAACCTTGTTTTTTGATCGTTTAATAGAAGCTGCTATGTCGATATTGTTGGAGCGAATCAGCAAGAAATCCCAGGATACAAGACGCCTTTCTGAACTTCCCAGGGCACCAAAATTGGCAAGTGGTCCAAAGGCATCTGAGCTAAAAGCAAAGGTCGAAGCTGAGCAGCATGCACTTCGTAGATTGCGAATGTGCCTCAGAGATGTTTGCAACCGGATATTGTATGACAAACGATTTAATGCCTTCCATTTTCCAGTCTCAGATGAAGATGCGCCTAATTATCGCTCAATTATACAGAACCCAATGGACATTGCTACCATCTTGCAGCATGTTGATAACGGCAACTATATTACATGTGCTGCATTTCTGCAGGACATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGACGACTACAATGGTACTAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATGCGGTGCACGGGATGCTCTCTCAAATGGACCCAGCACTGGCTGCATATTGTGACAAGATTGCTAGCCAAGGTGGCCCAGCGAATTTGCCCGATGAATTAGGTGAAACTACATTCCCTGCTACTCCTGTTGTACAGCTGGGCACCACTACTAGAATGAGTGCTCGACTTCGTCATGTTCAACCAGAGGTTAATATGGGTCAGGGTTACGAAGTATTGAAGCGGACTAAGAAGATCGGTGATGGTATAAATGCAGCAGAAGACAAATTGCAAGATTCAATACCGACAAAGTCCTCTCAGGAGCAGCATCAGGCACAAGACGTGGATTCTGAAAGAATGGAACCTATAGAAATAGATGGAGATTTGCATGGATCTTGTACAAATAACCTTGCTGATGGTAGCTGCCTTCATGATATCACAATGCTAGATGGTGAATTTTCAAGACAAGTAGAGTCTGTCAAGCAGCGTTTCGTAAAGCGCAGTGAAAAATACAACATCCCACAACTTGAAAGGCTTTACACGAGAATAATGAAGGGCGTGTTTGAAACCAGAGATAAAGGAATGAATGATGATGATCTCAAGACTTCAGTTTTGGGGTTTTTGTCGAAATTTGTAGAGGATGATGCAAATTTCTGA 3609 0.4447 MYPKDDPDSRPVRTSDRIKTRPPVYNRAPFLYYNSNLRRPRKSKNKTRTAASQIAKMLRPGNRKARDSNNNSGSANLRRSTRERRVNVNLMEFADSSGSEDADLMRPSYRPMRNRSNSVSRDDAISSKRKRAVDTKPTPRREGLRPRRSKAAGRERLILESDDDQDLSEEKVEQDETENGNDVEENDAEDGHNEMEGDAEGEDEGEDEGDEDGDEEGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKARPRSPRRVLHQGMGTKVSRDVRKGGSRVHKRHRLTRPEDSDDSLLVDELDQGPAIPWGRGGNRSGPPFLFGGVDTHGTTAWGLNLAASGWGHQGDAFATLTSGIQTAGPSSKGGADIQPLQIDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGGEARAEILDIHTRKWKHPPPEELKKELAASCVGYCGADLKALCTEAAIRAFRQKYPQVYTSDDKFLIDVDSIKVEKYHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEKVMGTISDIIPPVSVASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTMLEELPSDLPILLLGTSSAALADVEEVPTSVFPQRSVYQVNMPSTEDRTLFFDRLIEAAMSILLERISKKSQDTRRLSELPRAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHFPVSDEDAPNYRSIIQNPMDIATILQHVDNGNYITCAAFLQDIDLIVSNAKAYNGDDYNGTRIVSRACELRDAVHGMLSQMDPALAAYCDKIASQGGPANLPDELGETTFPATPVVQLGTTTRMSARLRHVQPEVNMGQGYEVLKRTKKIGDGINAAEDKLQDSIPTKSSQEQHQAQDVDSERMEPIEIDGDLHGSCTNNLADGSCLHDITMLDGEFSRQVESVKQRFVKRSEKYNIPQLERLYTRIMKGVFETRDKGMNDDDLKTSVLGFLSKFVEDDANF* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2412 1202 SUPERFAMILY Bromodomain 892 1007 IPR036427 GO:0005515
Mal7g2412 1202 Pfam ATPase family associated with various cellular activities (AAA) 416 551 IPR003959 GO:0005524|GO:0016887
Mal7g2412 1202 ProSitePatterns AAA-protein family signature. 521 539 IPR003960 GO:0005524|GO:0016887
Mal7g2412 1202 Pfam Bromodomain 910 977 IPR001487 GO:0005515
Mal7g2412 1202 Gene3D - 888 1017 IPR036427 GO:0005515
Mal7g2412 1202 PANTHER AAA DOMAIN-CONTAINING 5 1197 IPR045199 -
Mal7g2412 1202 Gene3D - 374 644 IPR027417 -
Mal7g2412 1202 MobiDBLite consensus disorder prediction 1 17 - -
Mal7g2412 1202 MobiDBLite consensus disorder prediction 122 161 - -
Mal7g2412 1202 Pfam AAA+ lid domain 578 615 IPR041569 -
Mal7g2412 1202 CDD AAA 412 551 - -
Mal7g2412 1202 MobiDBLite consensus disorder prediction 1 291 - -
Mal7g2412 1202 MobiDBLite consensus disorder prediction 224 254 - -
Mal7g2412 1202 Gene3D - 672 844 IPR027417 -
Mal7g2412 1202 MobiDBLite consensus disorder prediction 1081 1102 - -
Mal7g2412 1202 SMART bromo_6 896 1003 IPR001487 GO:0005515
Mal7g2412 1202 PANTHER BNAC08G44480D PROTEIN 5 1197 - -
Mal7g2412 1202 PRINTS Bromodomain signature 928 944 IPR001487 GO:0005515
Mal7g2412 1202 PRINTS Bromodomain signature 944 962 IPR001487 GO:0005515
Mal7g2412 1202 PRINTS Bromodomain signature 962 981 IPR001487 GO:0005515
Mal7g2412 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 641 IPR027417 -
Mal7g2412 1202 Gene3D - 552 637 - -
Mal7g2412 1202 ProSiteProfiles Bromodomain profile. 919 981 IPR001487 GO:0005515
Mal7g2412 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 700 915 IPR027417 -
Mal7g2412 1202 SMART AAA_5 412 553 IPR003593 -
Mal7g2412 1202 MobiDBLite consensus disorder prediction 162 223 - -
Mal7g2412 1202 CDD Bromo_AAA 896 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2412 Mal-Chr7 84584637 84590972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2412 362 616 Calmodulin-binding Proteins AT3G56690 36.293 3.72e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2412 K22531 - gmx:100787765 1990.31