Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2406 ATGGGAAGTTGCGTATCAACACAAGGCAAAAATGGTGGGCGAAAGAAATCAAAAGATCATCATCACCACAACAATAAACACAAAACAATTGAGCAAAACCAAGAGCCTCCCACACCAACGGCGCGTAAATCAAGCGTGACAGCGCGTTCACTAAACGTGGTAACGAATCCAAGTCCTGGAAACATATTTGATAAATATGAATTAGGAAAAGAGCTTGGGAGAGGCGAATTCGGTGTGACACATCGTTGTGTGGACCTTAAAACGGGCGAGGCTTTCGCGTGTAAGAAGATAGCAAAGACGAAGCTGAGGACGGAGATTGATATTCAAGATGTGAGGAGAGAGGTTCAGATTATGAGGCATTTGCCTCAACATCCTAATATTGTGGCTTTTAGAGAAGCTTATGAAGATAGAGATGCTGTTTATCTTGTTATGGAATTGTGTGAAGGTGGTGAACTTTTTGATAGGATTGTTGCTAAAGGTCATTATACAGAAAGAGCTGCTGCTAATGTTGCCAAAACAATTCTTGAAGTTTGCAAGGTGTGCCATGAACATGGTGTGATACATAGGGACTTAAAACCTGAAAATTTCTTATTTGCAGATGCAAGTGAGGCAGCTTCACTAAAGGCAATTGATTTTGGTCTTTCCACTTTCTATGTAACCGGTGATCGATTCAATGAAATCGTTGGAAGTCCCTATTACATGGCTCCTGAGGTTTTAAGACGAAACTACGGACAAGAAATCGATATCTGGAGTACAGGCGTTATTCTTTATATTTTACTTTGCGGAGTTCCACCCTTTTGGGCAGAAACTGAAGAAGCTATAGCACAGGCGATTATCCGGGGTAATGTAGATTTCACAAGAGATCCTTGGCCTAAAGTTTCAGATGAAGCAAAATACCTTGTTAAGCGTATGCTTGATCCAAATCCATTCACCAGGATCAAAGTTCAAGAAGTTCTTGATCATTCCTGGATACTAAATAGGGAGCATGGTAGAAATGTTTCTCTTGGAGACCAAGTAAGAATGAGGATCAAACAATTCTCCTTGATGAACAGATTCAAAAAGAAAGTCCTAAGAGTGGTGGCTGATAACTTGCCAGATGAACAAATTGATGGGTTTAGGAAAATGTTTGATATGATGGACAAGGACAAAAATGGACACTTAACATTTGAAGAGCTCAAAGATGGTTTTGCAATGATTGGACACCCTATTCCTGATCCTGATCTTCAAACTTTAATAGATGCTGCAGATTGTGATGGAACTGGCACCTTGAATTGTGAAGAGTTCATCACAATGAGTGTTCATTTGAGAAGGATTGGAAATGATGAGCATCTCACTGAAGCATTCAATTTCTTTGACAAGAATAATAGTGGATATGTTGAGTTTGATGAGTTGAAAGATGCCTTATCAGATGATGGTTCGACCGATGACCAAGTGATCAGAGACATTCTCAACGATGTCGACTTGGATAAGGATGGTCGAGTAAGTTTTGACGAATTTAAGGCAATGATGAAGACAGGAGGAGATTGGAAAATGGCATCTCGACAATATTCAAGAGCATTACTAAATGCATTAAGCTTCAGAATGTTTAAAGACAAATCTGTGGGAGTAGCAACTAACTAA 1620 0.3969 MGSCVSTQGKNGGRKKSKDHHHHNNKHKTIEQNQEPPTPTARKSSVTARSLNVVTNPSPGNIFDKYELGKELGRGEFGVTHRCVDLKTGEAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPQHPNIVAFREAYEDRDAVYLVMELCEGGELFDRIVAKGHYTERAAANVAKTILEVCKVCHEHGVIHRDLKPENFLFADASEAASLKAIDFGLSTFYVTGDRFNEIVGSPYYMAPEVLRRNYGQEIDIWSTGVILYILLCGVPPFWAETEEAIAQAIIRGNVDFTRDPWPKVSDEAKYLVKRMLDPNPFTRIKVQEVLDHSWILNREHGRNVSLGDQVRMRIKQFSLMNRFKKKVLRVVADNLPDEQIDGFRKMFDMMDKDKNGHLTFEELKDGFAMIGHPIPDPDLQTLIDAADCDGTGTLNCEEFITMSVHLRRIGNDEHLTEAFNFFDKNNSGYVEFDELKDALSDDGSTDDQVIRDILNDVDLDKDGRVSFDEFKAMMKTGGDWKMASRQYSRALLNALSFRMFKDKSVGVATN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2406 539 Gene3D - 333 506 - -
Mal7g2406 539 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 519 - -
Mal7g2406 539 Pfam Protein kinase domain 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2406 539 SMART serkin_6 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2406 539 SMART efh_1 443 471 IPR002048 GO:0005509
Mal7g2406 539 SMART efh_1 371 399 IPR002048 GO:0005509
Mal7g2406 539 SMART efh_1 478 506 IPR002048 GO:0005509
Mal7g2406 539 SMART efh_1 407 435 IPR002048 GO:0005509
Mal7g2406 539 MobiDBLite consensus disorder prediction 1 53 - -
Mal7g2406 539 Gene3D Transferase(Phosphotransferase) domain 1 152 332 - -
Mal7g2406 539 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Mal7g2406 539 CDD EFh 443 504 IPR002048 GO:0005509
Mal7g2406 539 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Mal7g2406 539 CDD EFh 372 431 IPR002048 GO:0005509
Mal7g2406 539 SUPERFAMILY Protein kinase-like (PK-like) 46 329 IPR011009 -
Mal7g2406 539 Pfam EF-hand domain pair 373 431 IPR002048 GO:0005509
Mal7g2406 539 Pfam EF-hand domain pair 442 504 IPR002048 GO:0005509
Mal7g2406 539 CDD STKc_CAMK 65 323 - -
Mal7g2406 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Mal7g2406 539 Gene3D Phosphorylase Kinase; domain 1 68 151 - -
Mal7g2406 539 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 24 44 519 - -
Mal7g2406 539 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Mal7g2406 539 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Mal7g2406 539 SUPERFAMILY EF-hand 363 503 IPR011992 -
Mal7g2406 539 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Mal7g2406 539 ProSiteProfiles Protein kinase domain profile. 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2406 539 ProSiteProfiles EF-hand calcium-binding domain profile. 439 473 IPR002048 GO:0005509
Mal7g2406 539 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Mal7g2406 539 MobiDBLite consensus disorder prediction 31 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2406 Mal-Chr7 84547190 84550046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2406 1 531 EF-hand Containing Proteins AT2G31500 66.114 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal7g2406 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2406 K13412 - gmx:100818929 877.085