Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2368 ATGGGAATATCGATTGATCCAATCAAAACTATCAATGACTCTAAGGAAACATGGAGGCTTGCTGTTCATGTTATCGATATCTGGACTGTTGTGAACAACAAAGGAAATCAACACTTTGAGATGGTTCTTATGGATTCTAATGGTGATAGGATCCAAGTGTTGATTCCTACTGATCAGACACCAAAGTGGAAGGAAAAGATCAAAGAAAATATGACATGCATTATCAACAATGGTTCTATATATAATAATGATTTCCAGTGGAAGCTATGTGATCACACAAAGAAATTTGTGTTCAATGGAGGTACTACTGTCAAACCAAGAGAGATTAGTGAAATCCCTCCAAAACAATACTATTTCAAAGATTTTGCTGAAATCATTCAAGGGAATTATAAACTTGAAAGGCTTGAAGATATCATTGGTGCTGTGCAGGAAATAGTTAACCTTCCTTCAAACTCTAGCGGCAAAAAAGTGGTGGTAGATGTCAATCTCAAGGATTTGAAGGGCAATGTTATTAAATGCAGTCTTTGGAAAAGCTATGGAACCAAGTTCCTAAATTACTACAACCAAAACAAAAATTGTGGAGCAATAGTACTTATTCTCACACATGCAATGATCAAAGATACACAAGTTTCTAATGGATGGAATGGATCAAAGCTGTTGATCAATGAAAATATTCCAGAAATCAAAGAATTCAAGGCTAAGTTACCTAATTCTGAGCAGAATGAAAGGCCTATTCAATCAACTCAATCTAGGTCAAATTGGACAGGTGGTTCACAATTCACACCTCAACAAAAGCTTTTCTATAATGCAACCTCTATGACCTTGAAGGATATTTGCAACCTCAAAGAGGAAATTGTTTGCATTACTATTGCTACTACATTGAAGTTTGTTGTTTCTAAATATGGTTGGTTTTACTATGGCTGCACTGGATGCACTAAAAAGGCAGTTGATCCTAAAAATCCATACAAATGTACATGTGGAACAAAGGTGAAAGAGGCAATTCCAAGGTATAAAATTGACATTTATGTCAAGTGTGGTGATGCAAAACTTTGGTTTGTGTTTTGGGATACTGATTGTGCTGCTATTATTAAAAAGTCTGCTGCTGATATGTATCAATTAATGATCGAGCAAGGAGAAGATGATCCTTTGGTTTATCCAGATGAACTAAATTGCATGTTGGATAAGAAAATGGTGTTTAAGGTCAAGGTTCAACCAGGTTATAATCAAGCTTCTGTGTACATGTTGTCAACTGATGATGCTATTATCAATCAAGTTGAGAATGACCTAAACATTGATGATGAGAATCATTCTAAACCAGAAATTGCCAAGTCTGATAACACTGAAGAAAATTCAATTGTTCCAGCCCCATCTTTATCTGCATGTGGTGAAAATGATCTTGAAGGAATGAGTTCAATCACTCCAGCTAAAAGAGTTTTCAGTCAAGATACAGCTGATAACTTGGAATGTGAAGTTTTGGGATCAACTCAACATTCAGGAACCAAACCTGTTAAACATGTGAAGATTGAACCTAACAATTAA 1539 0.3548 MGISIDPIKTINDSKETWRLAVHVIDIWTVVNNKGNQHFEMVLMDSNGDRIQVLIPTDQTPKWKEKIKENMTCIINNGSIYNNDFQWKLCDHTKKFVFNGGTTVKPREISEIPPKQYYFKDFAEIIQGNYKLERLEDIIGAVQEIVNLPSNSSGKKVVVDVNLKDLKGNVIKCSLWKSYGTKFLNYYNQNKNCGAIVLILTHAMIKDTQVSNGWNGSKLLINENIPEIKEFKAKLPNSEQNERPIQSTQSRSNWTGGSQFTPQQKLFYNATSMTLKDICNLKEEIVCITIATTLKFVVSKYGWFYYGCTGCTKKAVDPKNPYKCTCGTKVKEAIPRYKIDIYVKCGDAKLWFVFWDTDCAAIIKKSAADMYQLMIEQGEDDPLVYPDELNCMLDKKMVFKVKVQPGYNQASVYMLSTDDAIINQVENDLNIDDENHSKPEIAKSDNTEENSIVPAPSLSACGENDLEGMSSITPAKRVFSQDTADNLECEVLGSTQHSGTKPVKHVKIEPNN* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2368 512 MobiDBLite consensus disorder prediction 431 460 - -
Mal7g2368 512 SUPERFAMILY Nucleic acid-binding proteins 273 407 IPR012340 -
Mal7g2368 512 SUPERFAMILY Nucleic acid-binding proteins 4 106 IPR012340 -
Mal7g2368 512 CDD RPA1_DBD_B_like 137 232 - -
Mal7g2368 512 Gene3D - 110 246 IPR012340 -
Mal7g2368 512 MobiDBLite consensus disorder prediction 431 445 - -
Mal7g2368 512 Pfam Domain of unknown function DUF223 40 133 IPR003871 -
Mal7g2368 512 SUPERFAMILY Nucleic acid-binding proteins 117 240 IPR012340 -
Mal7g2368 512 MobiDBLite consensus disorder prediction 492 512 - -
Mal7g2368 512 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 37 374 - -
Mal7g2368 512 MobiDBLite consensus disorder prediction 239 258 - -
Mal7g2368 512 MobiDBLite consensus disorder prediction 236 258 - -
Mal7g2368 512 CDD RPA1_DBD_A_like 19 104 - -
Mal7g2368 512 PANTHER REPLICATION FACTOR A 1, RFA1 37 374 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g2368 512 Gene3D - 256 425 IPR012340 -
Mal7g2368 512 Gene3D - 3 108 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2368 Mal-Chr7 83282174 83284799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2368 1 379 Core DNA Replication Machinery Family AT5G08020 22.166 2.71e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2368 - - lang:109343677 338.191