Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2366 ATGGAGTCAGATCTTCAGCAACATCCAACTATGTTTCTAGATCATCAAAATCATCATCAACAACAAATGAATTCAGGGTTAACACGGTTTAAATCTGCTCCAAGTTCATATTTTTCGAATATAATTGATAAAGAGTTTTATGAGCATCTTTTCGATAGACCTTCAAGTCCTGAAACAGAACGAGTTTTTGCAAGGTTTATGAATAGTCTTAGTGGAAGTGGTGGTGGTGGTGATGCTGCAGAAAGTGTTTCTGTTACAGCTTCTATAGCTCCTATAGCTGATTCAGTAGTTGATTCATTGACTCAGAATCTATCAACTGTTCATCAACAACAGCTTCCTATTGTGAAGGAAGAGATTGATCAACAATCTCAAACTATGACATCAATGAATAATAATGAAAGTGTGGATCTTCAACAACTTCAAAGACAACAAAGTAATAATATGAATAATTATGGTGCTCCTCAGAATTTTTACCAAAGTTCAGGAAGACCACCTTTGCCAAATCAAATGAAGACGGGTCGTTCTAGTCTTATTAGACATGGTAGTTCACCTGCTGGATTGTTTTCAAACATTAACATTGATACTGGTTTTGCAGCTATGAGAGGAATAGGAACTATGGCAGCTGCAAATAGCACTAGCAAAGAAGCAAATTTTTCTTCTGCAGTACGGTTAAAGAATGCTCCAAACTACGCCTCAGCGTTAGGAGCTGAAATTGGGAGTAATAGCATTCCACAAAACAATCTTGAACCTGAAGGTTTTGCTGAAACCCGGGGTAACGATTTTATCCCGGGTTTCCCCCTAGGTACTACATGGGAGGATACTGCAATGATTTCTGACAATATTACTGGTCTAAAAAGATACAGAGATGATGATGATGTAAAACCATTTCCTGCAGGTTTAAATCCAGCTGAAACCAAGAATGAAACAGGAGGCCAGCCTCCTACTGCTCCTTTGGCTCATCAGATGAGTATGCCAAATACTACGGCCGAATTGGAAGCCATTGAGAAGTTTTTGCAGTTCTCAGATTCTGTTCCGTGCAAAATTCGCGCTAAACGTGGCTGTGCCACTCACCCAAGAAGCATTGCAGAAAGGGTTAGAAGAACTAAAATTAGCGAGCGAATGAGGAAACTACAAGATCTCGTGCCAAACATGGATAAGCAAACAAATACATCAGACATGTTGGACTTGGCTGTTGAGTACATTAAAGACCTACAAAAACAAGTTGAGACTCTTTCAGACAATCGAGCTAAGTGCACGTGTTCACACAAGCAACAGCAATAA 1281 0.3934 MESDLQQHPTMFLDHQNHHQQQMNSGLTRFKSAPSSYFSNIIDKEFYEHLFDRPSSPETERVFARFMNSLSGSGGGGDAAESVSVTASIAPIADSVVDSLTQNLSTVHQQQLPIVKEEIDQQSQTMTSMNNNESVDLQQLQRQQSNNMNNYGAPQNFYQSSGRPPLPNQMKTGRSSLIRHGSSPAGLFSNINIDTGFAAMRGIGTMAAANSTSKEANFSSAVRLKNAPNYASALGAEIGSNSIPQNNLEPEGFAETRGNDFIPGFPLGTTWEDTAMISDNITGLKRYRDDDDVKPFPAGLNPAETKNETGGQPPTAPLAHQMSMPNTTAELEAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQKQVETLSDNRAKCTCSHKQQQ* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2366 426 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 357 417 IPR036638 GO:0046983
Mal7g2366 426 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 423 - -
Mal7g2366 426 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 423 - -
Mal7g2366 426 Pfam Helix-loop-helix DNA-binding domain 359 405 IPR011598 GO:0046983
Mal7g2366 426 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 354 404 IPR011598 GO:0046983
Mal7g2366 426 SMART finulus 360 410 IPR011598 GO:0046983
Mal7g2366 426 Gene3D - 355 426 IPR036638 GO:0046983
Mal7g2366 426 Coils Coil 394 414 - -
Mal7g2366 426 MobiDBLite consensus disorder prediction 293 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2366 Mal-Chr7 83088609 83091676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2366 1 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.860 4.74e-78 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g2366 HLH 8.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2366 - - gmx:100803833 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2366 7 83088609 83091676 Mal7g2366 7 83088609 83091676 ECH
Mal3g3573 3 112943473 112945649 Mal7g2366 7 83088609 83091676 ECH
Mal1g3709 1 71120667 71123568 Mal7g2366 7 83088609 83091676 ECH