Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2356 ATGAACAACAATTGGCTTTCATTCCCTCTCTCACCTTCTCATTCTTCCTTACCTTCTAATGATCTTCAAGCAACTCAATATCATCACTTTCCTCTTGGATTAGTCAATGACAACATGGAAAACCCTTTCCAAAATCATGATTGGAATCTTATGAACACACAAAGTAGCAACGAAGTTCCAAAGGTTGCAGATTTTCTAGGTGTATGCAAGTCTGAAAATCACTCAGATCTTGTTACACCAAATGAAATTCAATTAAATGATTCAGATAATTATTTGTTTGGAAATAACAATAGTCTCATGCCAATGCAAAACCAAATGGTAACAACATGCACCAATGAGTATCAAGAAAATGGTAGTAATAGTAATTTGCAATCATTGACATTATCTATGGGAAGTGGTAAGGATTCAACATGTGAAACTAGTGGTGACAATAGTACAAACACTGTTGAAGTTGCTGTTCCTAAAAGAACTTCAGAGACATTTGGGCAAAGAACTTCAATATATCGTGGTGTAACAAAACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAACAGCTGTAGAAGGGAAGGACAATCAAGAAAAGGCCGTCAAGGTGGATATGATAAAGAAGAGAAAGCTGCTAGGTCCTATGATTTAGCTGCCCTTAAGTACTGGGGGACATCTACCACTACTAACTTTCCAGTTAGCAACTATGAGAAAGAAATAGATGAAATGAAGCACATGACAAGACAAGAATTTGTAGCTTCTATTAGAAGGAAAAGCAGTGGTTTCTCGAGGGGTGCATCAATGTACCGTGGAGTTACAAGGCATCACCAACATGGAAGATGGCAGGCAAGGATTGGCAGAGTAGCAGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAAGAAGAGGCTGCAGAAGCATACGACATAGCTGCAATAAAATTCAGAGGACTCAACGCCGTAACAAACTTTGACATGAATCGTTATGATGTGAAAGCAATTCTTGAAAGCAATACACTCCCAATTGGAGGAGGAGCTGCAAAAAGACTAAAAGAAGCACAAGCTCTAGAAACTTCTAGAAAACGCGAAGAAATGCTTGCACTCAACTCATCATCTTTCCAATATGGAACATCAAGCTCTAGTAGTAACAGACTTCAACCTTACCCTCTCATGCAATATCATCATTCTCAATTTGAACAACAACCTCAACCATTGTTAACCTTACAAAACAACCATGAAAGCATGTCTCAGTTCTCTCAACATCAAGGTGGTGGTTATTTTCAAACACAGCTTGAGTTGTGCCAACAACAGAACCAAACATCTCAGAATTCATTCTACAATGGTTATTTTCAGAATCAGAACCATCCTGGTTTGTTTCAGATGAATAACAATATAGGGTCTTCTTCATCTTCTGTGATAGGAAATAACGTTGGTGGGTCAAGTGAGATTTATAATAATAATAATGGAGGGTTAATTGGTAATAATGCTGTGGAGGAATTTGTGCCGGTTAAGGTTGATTATGATATGCAAGGTGATGGAGGTGGTTTTGGCGGCTGGTCGGGGGCAGGAGAGAACATGCAGACATCAACTACTGCTGATTTGTTTACAATGTGGAATGACTATGAGGCAAGAGAAAATTAG 1638 0.3864 MNNNWLSFPLSPSHSSLPSNDLQATQYHHFPLGLVNDNMENPFQNHDWNLMNTQSSNEVPKVADFLGVCKSENHSDLVTPNEIQLNDSDNYLFGNNNSLMPMQNQMVTTCTNEYQENGSNSNLQSLTLSMGSGKDSTCETSGDNSTNTVEVAVPKRTSETFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARSYDLAALKYWGTSTTTNFPVSNYEKEIDEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKAILESNTLPIGGGAAKRLKEAQALETSRKREEMLALNSSSFQYGTSSSSSNRLQPYPLMQYHHSQFEQQPQPLLTLQNNHESMSQFSQHQGGGYFQTQLELCQQQNQTSQNSFYNGYFQNQNHPGLFQMNNNIGSSSSSVIGNNVGGSSEIYNNNNGGLIGNNAVEEFVPVKVDYDMQGDGGGFGGWSGAGENMQTSTTADLFTMWNDYEAREN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2356 545 SUPERFAMILY DNA-binding domain 166 232 IPR016177 GO:0003677
Mal7g2356 545 SMART rav1_2 167 236 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 SMART rav1_2 266 330 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 CDD AP2 265 324 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 Gene3D AP2/ERF domain 167 232 IPR036955 GO:0003700|GO:0006355
Mal7g2356 545 Gene3D AP2/ERF domain 266 326 IPR036955 GO:0003700|GO:0006355
Mal7g2356 545 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 538 - -
Mal7g2356 545 ProSiteProfiles AP2/ERF domain profile. 167 230 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 Pfam AP2 domain 167 222 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 Pfam AP2 domain 267 316 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 PRINTS Ethylene responsive element binding protein signature 168 179 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 PRINTS Ethylene responsive element binding protein signature 306 326 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 CDD AP2 166 232 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 4 538 - -
Mal7g2356 545 ProSiteProfiles AP2/ERF domain profile. 266 324 IPR001471 GO:0003700|GO:0006355
Mal7g2356 545 SUPERFAMILY DNA-binding domain 265 325 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2356 Mal-Chr7 82183943 82187033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2356 3 539 AP2-EREBP Transcription Factor Family AT1G51190 60.788 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal7g2356 AP2 4.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2356 K09285 - gmx:100788471 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2356 7 82183943 82187033 Mal7g2356 7 82183943 82187033 ECH