Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2340 ATGAGGAAGCCAGAAGTTGCATCTGGAAAAAACAATTCTAATAACAAGCTTAGAAAAGGATTGTGGTCACCAGAGGAAGATGAGAAGCTAATGAACTACATGTTAAACAGTGGACAAGGTTGTTGGAGTGATGTTGCTAGAAATGCTGGATTGCAAAGATGTGGAAAAAGTTGTAGGCTAAGATGGATCAATTATTTGAGGCCCGATCTTAAACGTGGTGCATTCTCACCACAAGAAGAAGAACATATCATTCATTTGCATTCCCTTCTTGGAAACAGATGGTCTCAAATTGCGGCACGCTTACCTGGAAGAACGGACAATGAAATCAAGAACTTTTGGAATTCAACAATAAAGAAAAGACTGAAGAACATGTCGTCGAACACTTCACCAAACGCAAGCGACGAATCCTCATACGATCCTAACAAAGACCATAGTATGGGAGGAGGGTTTATAACTTCTTCAACACAAGATCAACAACATATTGATCATTTTATGCCTATGTTCAACACTTCATCTCCATCACCACCATCAATGCAAAACACAGTTTTCAATACCATCATGTCAGCTTCTGGTGGTGGATTCTTCAATAATAGTACTACAGGAACATACTTGTCACAAAATAATCATGATAACAAAAGTTTTTATTTGGAAAAAGTGTTTGGGAGTGTAAATATTAATGGTGGAGAAGGGTATGAGATGGAAAATTACAATGTTCCTCCTCTTGAGAGTGTTAATAGTACTATTACTTCTGAACATAGTCTAAAAATGGAGAATGCATGCAATGGAGAAGATACTAATTACAATATTAGTAGCTATAACTTTGATGACATAAACAATATTGTTGTTAATTGCAATGTTAGCAAAAAAATTGATCAAAATAGAGCTAATGATCATGAGGTGGAGAATTTATTTCATGGAGATTTAACTGTTGGAGATTGGGATTTGGAAGATTTGATGAAAGATGTTTCATCATTTCCATTTCTTGATTTTTCAAACTGA 999 0.3554 MRKPEVASGKNNSNNKLRKGLWSPEEDEKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEEHIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSNTSPNASDESSYDPNKDHSMGGGFITSSTQDQQHIDHFMPMFNTSSPSPPSMQNTVFNTIMSASGGGFFNNSTTGTYLSQNNHDNKSFYLEKVFGSVNINGGEGYEMENYNVPPLESVNSTITSEHSLKMENACNGEDTNYNISSYNFDDINNIVVNCNVSKKIDQNRANDHEVENLFHGDLTVGDWDLEDLMKDVSSFPFLDFSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2340 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Mal7g2340 332 CDD SANT 22 66 IPR001005 -
Mal7g2340 332 SMART sant 71 119 IPR001005 -
Mal7g2340 332 SMART sant 18 68 IPR001005 -
Mal7g2340 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Mal7g2340 332 PANTHER MYB DOMAIN PROTEIN 55 8 331 - -
Mal7g2340 332 Gene3D - 73 145 - -
Mal7g2340 332 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Mal7g2340 332 MobiDBLite consensus disorder prediction 123 154 - -
Mal7g2340 332 Gene3D - 16 72 - -
Mal7g2340 332 CDD SANT 74 114 IPR001005 -
Mal7g2340 332 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mal7g2340 332 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Mal7g2340 332 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Mal7g2340 332 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Mal7g2340 332 MobiDBLite consensus disorder prediction 1 21 - -
Mal7g2340 332 PANTHER MYB TRANSCRIPTION FACTOR 8 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2340 Mal-Chr7 81674380 81676850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2340 3 330 MYB Transcription Factor Family AT3G08500 45.559 2.58e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g2340 Myb_DNA-binding 4.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2340 K09422 - gmx:100786151 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2340 7 81674380 81676850 Mal7g2340 7 81674380 81676850 ECH
Mal4g0509 4 4875639 4878329 Mal7g2340 7 81674380 81676850 PCT