Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2303 ATGAGTTTTGCTTTTCGAGGGAGTCGGGGAGATATTGAAAACGGATTTTCAGAAAATGTTCCTGAGAGAACCTCAATGCGGGTTCATCCATCTCGACCAGTAAATTGCAATTCTCTACTTCTTATTACAACAGATATTTTGATGTTATACATGATATTAAGCGCTCCTCCGATGTTATATTATTTTTTGCGCTGGATCGTACTGGTGATCTTTGTGATCCATACAAGTCTGAGAATGTATGTAATTTGTCGATATTTTCAAGCACGGGCCAGGTCTCATGCTGTAGCAGCCTCTGGGTTGCTTGGCCATGCTGAGTTACGATTTCACATGCCCCCATCTAGAGGAAGATTGCAGGAACTTAGACTTCAGCTTGCACTTGTTGACCGAGATTTCAATGAGCTAGATCATGATACTTTGAGAGCTCTGGGCTTTGCTTCTAGGACTCCTTCAATGAATGAGGAAGAGATAAATGCCTTGCCTGTTCACAAATACAAAGTTCCTGGCCCAACAAATGACAAAGATGGATCCACCGCTTTGACATCCTCTTCTTCAGAGGCAGCTGAGATTAAACAAAATTTCGAAGGAGCAGAGGGAAGTGCCAATGGTCAAGAAGATGAGCTGACATGTGCTATATGCTTGGACGATGTTATGAGGGGGGAACTTGTGCGTAGCTTGCCATGCTCGCATCAGTATCATGCACCCTGCATTGATCCATGGCTGCGGCAACAACGAACATGTCCTATATGCAAATTTAGGATTGGGTCGAGAAGGCAGGGAGAGCGAGTCAGATGA 792 0.4419 MSFAFRGSRGDIENGFSENVPERTSMRVHPSRPVNCNSLLLITTDILMLYMILSAPPMLYYFLRWIVLVIFVIHTSLRMYVICRYFQARARSHAVAASGLLGHAELRFHMPPSRGRLQELRLQLALVDRDFNELDHDTLRALGFASRTPSMNEEEINALPVHKYKVPGPTNDKDGSTALTSSSSEAAEIKQNFEGAEGSANGQEDELTCAICLDDVMRGELVRSLPCSHQYHAPCIDPWLRQQRTCPICKFRIGSRRQGERVR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2303 263 CDD RING-H2_PA-TM-RING 208 250 - -
Mal7g2303 263 SUPERFAMILY RING/U-box 203 255 - -
Mal7g2303 263 MobiDBLite consensus disorder prediction 164 186 - -
Mal7g2303 263 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Mal7g2303 263 PANTHER TARGET OF ERK KINASE MPK-1 1 258 - -
Mal7g2303 263 Pfam Ring finger domain 208 250 IPR001841 -
Mal7g2303 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 255 IPR013083 -
Mal7g2303 263 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 258 - -
Mal7g2303 263 SMART ring_2 209 249 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2303 Mal-Chr7 81107567 81110251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2303 1 258 C3H Transcription Factor Family AT3G55530 55.849 1.43e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2303 K16283 - gmx:100805406 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2303 7 81107567 81110251 Mal7g2303 7 81107567 81110251 ECH