Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2293 ATGGAAACCATGGCTTCGATGACAGATCCTTCCCTGGAAGACACTGATTTTTCAGAAACCATGAAGTTCATAACCCAAATCCTTATGGAAGAAAACGTTGACCAGAGACCCTTTTATGACCCACTTAGCTTACAAATCACTGAAAAATCATTCCATGATGCTCTTTCCCCTAATCAACACCCCTTACATTTTCATAACCCTAATGGCCAAACCAGCACCAGCATTAACAGCAATAGCAGCAGTAGCAGCAGCATCGACGATGATTCTCGAGTTTCCAAACCCCTTTCCCTTGATAGTGTCAGTAATTTGGATTCTTCTATTACCAATTTATTAGCACAAAACATTTTTAGTAATGCAGATTCTGTTTCTCAATTCAATAGAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAACTCTTGACTGGTTTAGAATCGTCTAATTTAAATATGTCGAAGGGTAGAAAGAATCACGAGCGCGAAGAAGAAGAAGAAGAAGTGAGAAGTAATAAACAATCAGCTATTAGTGCTGTTGATGAGGAGGAATTATCAGAAATGTTTGATAAAGCTTTGCTTAATATCGAACGTGAATTTTTGCAGAATGAGCAACCATCTTCATCTAATGGAGGAATGGCTCGTCCAAAGAAACGTGATAGCGACAACAAAACGATAGATTTAAGGAATCTTCTGCTTATGTGTTCACAAGCTATGTATGCCAATGACAATAGAAATGCTAATGATCTTTTGAAGCAGATTAGGGAACATTCTTCACCCTTTGGAGATGCATCACAAAGGGTGGCTCATTACTTTGCCAATGGCCTTGAGGCTCGTCTTGTAGGCGATAGAGCCGGTGCACAAACATTCTATTCCTCGCCGAGTACCAAGAGAATCACTGCTGCTGAGTTTTTGAAAGCATATCAAGTTCATTTTACCAGCCCTCCGTTCAAAAAATTTGCATATTTGTTTGCAAATGAAATGATTATGAAAGTTGCTGCAAAAGCTGAAACCCTTCATATTATTGATTTTGGTATCCTTTATGGTTTTCAATGGCCAATGCTTATTAAGTTTCTATCAAATAGAGAAGGTGGACCGCCAAAGCTGAGGATCACTGGGATAGAATTCCCCTTACCAGGCTTTCGCCCGACAGAAAGAATCGAGGAGACCGGTCGTCGACTTGCTAACTATTGCAAGCGTTTCAATGTTCCGTTCGAGTACAATGCCTTAGCGTCGCGGAAATGGGAAACAATTCGAGTTGAAGATCTTAAAATCAAGAGCAACGAGGTAATTGCTGTGAACTGTGTGGGGAGGTTTAAGAATTTACTAGATGAGAGTATTGAAGTTAATAGTCCTAGAAACGTGGTTCTGCACTTGATTAGGAAGATAAATCCGGATATTTTCGCTCTGTCTATTATTAATGGATCATATAATTTACCTTTCTTTGCTACAAGGTTTAGGGAGGCACTGTTTAATTTTTCTGCTATTTATGATATGTTGGACACTGTCATACCAAAGGAAAATGAATGGAGGATGATGATTGAGAGGGAAATTATGGGTAGGGAAGTTATGAATGTTGTAGCATGTGAAGGTTTAGAAAGAGTTGAGAGGCCTGAGACATATAAACAATGGCAGGCTAGGATTACAAGAGCTGGTTTCAAGCAGCTTCCATTGGACTCAGAATTAATGGAAAAATTTAGGACTAAGTTAAAGCAATGGTACCATAGAGATTTTGTATTTGATGAAGACAGCAATTGGATGATTCAAGGTTGGAAAGGTCGTATTTTATATGCTTCAACTTGTTGGGTGCCGACATAA 1818 0.3922 METMASMTDPSLEDTDFSETMKFITQILMEENVDQRPFYDPLSLQITEKSFHDALSPNQHPLHFHNPNGQTSTSINSNSSSSSSIDDDSRVSKPLSLDSVSNLDSSITNLLAQNIFSNADSVSQFNRGFEEANKFLPPQPQLLTGLESSNLNMSKGRKNHEREEEEEEVRSNKQSAISAVDEEELSEMFDKALLNIEREFLQNEQPSSSNGGMARPKKRDSDNKTIDLRNLLLMCSQAMYANDNRNANDLLKQIREHSSPFGDASQRVAHYFANGLEARLVGDRAGAQTFYSSPSTKRITAAEFLKAYQVHFTSPPFKKFAYLFANEMIMKVAAKAETLHIIDFGILYGFQWPMLIKFLSNREGGPPKLRITGIEFPLPGFRPTERIEETGRRLANYCKRFNVPFEYNALASRKWETIRVEDLKIKSNEVIAVNCVGRFKNLLDESIEVNSPRNVVLHLIRKINPDIFALSIINGSYNLPFFATRFREALFNFSAIYDMLDTVIPKENEWRMMIEREIMGREVMNVVACEGLERVERPETYKQWQARITRAGFKQLPLDSELMEKFRTKLKQWYHRDFVFDEDSNWMIQGWKGRILYASTCWVPT* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2293 605 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 604 IPR005202 -
Mal7g2293 605 MobiDBLite consensus disorder prediction 200 214 - -
Mal7g2293 605 MobiDBLite consensus disorder prediction 137 177 - -
Mal7g2293 605 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 7 604 - -
Mal7g2293 605 MobiDBLite consensus disorder prediction 61 93 - -
Mal7g2293 605 MobiDBLite consensus disorder prediction 54 93 - -
Mal7g2293 605 ProSiteProfiles GRAS family profile. 219 603 IPR005202 -
Mal7g2293 605 MobiDBLite consensus disorder prediction 200 222 - -
Mal7g2293 605 MobiDBLite consensus disorder prediction 154 172 - -
Mal7g2293 605 Pfam GRAS domain family 228 602 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2293 Mal-Chr7 80880234 80882051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2293 20 605 GRAS Transcription Factor Family AT1G07530 45.560 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal7g2293 GRAS 2.4e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2293 - - gmx:100795855 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2293 7 80880234 80882051 Mal7g2293 7 80880234 80882051 ECH
Mal4g0534 4 5139267 5141228 Mal7g2293 7 80880234 80882051 ECH
Mal7g2293 7 80880234 80882051 Mal4g0536 4 5151174 5153399 PCT