Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2292 ATGGATCCAAACTTTCCTCAAGCTAGCAATTTTATGAACAGCTACTACCACTTTGATGAAGATGGGAGGATAGTTGTTTCTGAGTCTGATCAAAATCAATATGATAGCCTTCTTGATGCTGATCCAAGTCAATATGATAGCTTCCTTGGTGCTGATGCACTTGGTTTTGCAGCCACCACCTTCCCTATAGAAGGTTATATGGCCTCGGCGACAGATCCTTCCATGGAAGACACTGATTTCTCAGATACTGCAAAGTTCATAAGCCAAATCCTGATGGAGGAAAACGTTGACCAGAGACCGTTTTATGACCCACTTAGCTTGCAAATGACAGAAAAATCATTCTATGATGCTCTCTTACACAAAAGTAAACCTCTTTCCCCTAATCAACACCCCTTAGATATTCATAACTCTGATGGCATAACCAGCAGCAACAGCAATAGCAATAGCAGCACCGACGATTCTCGAGAGTCAAAACCCCTTTCACCTGATACACCTGTTTCTGATCATGTTAATCATGTTTTTCAGTTTAATTCCCCTTCTATTTCTCAACCTCGTTCTACTGGTGTTAGTGATGGACTCAGAGATTTGGATTCTTCTATTACACAGATGGCACAAAACATTTTCAGTGATGCAGATTCTGTTTCCCTATTCAACAAAGGTTTAGAAGAAGCCAACAAGTTTCTTCCTCCACAGCCTCAACTCTTGACTGGTTTTGAATCATTAAATTTCCATATGGTTAAGAAGGAAGAGAATCCTTTTGTGTTGAAGGGTAGAAAGAATCACAAGCGCGAAGAAAGTGATGGTGAAGAAGGAGAAGCTAGGAGAAGTAACAAGCAATCAGCTATTAGTGTTGTTGACGAGGATGAATTATCGGAGATGTTTGATAAAGTTTTGCTTAATGTGGGACATATGCCACTATGCAATGAAAATGATTCCTTGCAGAATGGACAAGTGAAAACTGAGGAGCCATCTCCATCAAATGGCGGGAAGGCTCGTCCCAAGAAACAAGGAAAGAAGAATGAAACAATAGATTTGAGGAATCTTCTGCTTATGTGTTCACAATCTGTGTATGCCAATGACAACAGAAGTGCTAATGAACTTCTGAAGCAGATTAGGCAGCATTCGTCACCCTCTGGGGATGGACCGCAGAGGTTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCCTTGTCGGCTATGGTACTGGAGCACAAACATTCCATTCCTCTCCGAGCACCAAGAGGATCTCTACTGCTGAGTTTTTGAAAGCATATCAAGTTCATCTATCTACTAGTCCATTCAAAAAGTTTGCATACTTCTATGCAAATAAAATGATTATGAACGCTTCTGCAAATGCTGAAACCCTTCATATCATTGATTTTGGTATCCTATATGGTTTTCAGTGGCCAATACTTATAAAGTTTTTATCAGATAGAGAAGGTGGACCGCCAAACCTGAAGATCACCGGGATAGAGTTCCCTTTACCTGGCTTTCGTCCAATGGAAAGAATCGAAGAAACTGGTCGTCGTCTTGCCGACTATTGCAAGCGTTTCAATGTTCCCTTTGAATTTAATGCCATACCATCGCGTTATTGGGAAACAATTCGAGTTGAAGATCTTAAAATCAAGAGCAATGAGGTAGTTGTTGTGAACTCTTTGATGAGATTTAAGAATTTACTGGATGAAAGTATTGAAGTGAACAGTCCTAGAAACGCGGTTCTGCATTTGATCAGAAAGATAAATCCTGCTATTTTTGTTCAGTCAATTGTTAATGGATCATATAATTCGCCATTCTTTGCTACACGGTTTAGGGAGGCACTGTTTCATTTTTCTGCTATTTATGATATGTTTGACACTGTCATACCGCGCGAAAACAAATACAGGATGATGATGGAGAGGGAAAGTATTGGTAGAGAGGCTATGAACGTTGTAGCTTGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATATAAACAGTGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAGCTTCCATTGAATTTGGAATTAATGGACAAATTTAGGACAAAGTTACAGCAATGTTACCATAAAGATTTTGTTTTTGATGAAGACAACAATTGGATGCTTCAAGGTTGGAAAGGACGCATTTTATATGCTTCCACATGTTGGGTGCCAGCATAA 2169 0.4025 MDPNFPQASNFMNSYYHFDEDGRIVVSESDQNQYDSLLDADPSQYDSFLGADALGFAATTFPIEGYMASATDPSMEDTDFSDTAKFISQILMEENVDQRPFYDPLSLQMTEKSFYDALLHKSKPLSPNQHPLDIHNSDGITSSNSNSNSSTDDSRESKPLSPDTPVSDHVNHVFQFNSPSISQPRSTGVSDGLRDLDSSITQMAQNIFSDADSVSLFNKGLEEANKFLPPQPQLLTGFESLNFHMVKKEENPFVLKGRKNHKREESDGEEGEARRSNKQSAISVVDEDELSEMFDKVLLNVGHMPLCNENDSLQNGQVKTEEPSPSNGGKARPKKQGKKNETIDLRNLLLMCSQSVYANDNRSANELLKQIRQHSSPSGDGPQRLAHYFANGLEARLVGYGTGAQTFHSSPSTKRISTAEFLKAYQVHLSTSPFKKFAYFYANKMIMNASANAETLHIIDFGILYGFQWPILIKFLSDREGGPPNLKITGIEFPLPGFRPMERIEETGRRLADYCKRFNVPFEFNAIPSRYWETIRVEDLKIKSNEVVVVNSLMRFKNLLDESIEVNSPRNAVLHLIRKINPAIFVQSIVNGSYNSPFFATRFREALFHFSAIYDMFDTVIPRENKYRMMMERESIGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLNLELMDKFRTKLQQCYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2292 722 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 721 IPR005202 -
Mal7g2292 722 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 62 721 - -
Mal7g2292 722 MobiDBLite consensus disorder prediction 175 194 - -
Mal7g2292 722 ProSiteProfiles GRAS family profile. 336 720 IPR005202 -
Mal7g2292 722 MobiDBLite consensus disorder prediction 125 170 - -
Mal7g2292 722 MobiDBLite consensus disorder prediction 254 286 - -
Mal7g2292 722 MobiDBLite consensus disorder prediction 129 155 - -
Mal7g2292 722 MobiDBLite consensus disorder prediction 254 276 - -
Mal7g2292 722 MobiDBLite consensus disorder prediction 308 324 - -
Mal7g2292 722 MobiDBLite consensus disorder prediction 308 340 - -
Mal7g2292 722 Pfam GRAS domain family 345 719 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2292 Mal-Chr7 80875756 80877924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2292 85 722 GRAS Transcription Factor Family AT1G07530 48.567 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal7g2292 GRAS 3.1e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2292 - - adu:107476834 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2292 7 80875756 80877924 Mal7g2292 7 80875756 80877924 ECH
Mal4g0536 4 5151174 5153399 Mal7g2292 7 80875756 80877924 PCT
Mal7g2292 7 80875756 80877924 Mal4g0538 4 5190338 5192203 PCT