Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2290 ATGGCTGTTGTGAATCAATTGGGATTAGACAAGGTTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCCGGGCTCACTAGAGAAAACGTTGCAAGCCATCTTCAGAAATACCGTTTGTGTCCACAAGATTCAATATTTGGGGCAACCTCAATAAATGAAATTGATCTTCAAACCTTTTCAGCTTCTGGCCAGCTCTCGGCGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTATCAGTTCTGGAAACTCAAAACTAAGATTTGGAGAAGGGCAACTGCAACATATGAGCAGCAGTAAACCGATGAACTTTCTTCATGGAATCCCTACCAACATGGAGCCGAAGCAGTTTGCCAATTTTCACCAGTCTGCCCAATCCTTTGGCAGCACAAATACGCGAGTCAATGCTTCTGCTGCAAAAAGAAACCCCTGGTTGATGCAGATGGCTCAGTCTCAACCAAGAGGTCAGATTCTAAATGAGAATATCAATTCTTATGCTACAAGGTTTCCATCGTCTTTGATGTAA 528 0.4261 MAVVNQLGLDKVVPKKIMEMMNVPGLTRENVASHLQKYRLCPQDSIFGATSINEIDLQTFSASGQLSAQSLAKLQAAGLISSGNSKLRFGEGQLQHMSSSKPMNFLHGIPTNMEPKQFANFHQSAQSFGSTNTRVNASAAKRNPWLMQMAQSQPRGQILNENINSYATRFPSSLM* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2290 175 Gene3D - 1 43 - -
Mal7g2290 175 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 3 40 IPR006447 GO:0003677
Mal7g2290 175 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 40 IPR045279 GO:0009736
Mal7g2290 175 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 40 - -
Mal7g2290 175 PANTHER TWO-COMPONENT RESPONSE REGULATOR 62 173 - -
Mal7g2290 175 PANTHER TWO-COMPONENT RESPONSE REGULATOR 62 173 IPR045279 GO:0009736
Mal7g2290 175 SUPERFAMILY Homeodomain-like 3 41 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2290 Mal-Chr7 80849028 80850099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2290 1 114 Response Regulator Gene Family AT3G16857 43.750 4.50e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal7g2290 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2290 - K14491 mtr:MTR_2g034960 277.33