Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2279 ATGGGAATTAGTATTGTGTCAGCCATGGGAGTTTGTTTGGGCGGTCAAATCAAAGCTGAAGGCCCAACTAATTCAGTTTCAAGGTTAAGTACAAAGAATGTGAAAGGTGATACAGAAGATGTCGGCAGCCTATGTTGTAAGGTTTCTGTTGATCTCAGTAACTCAAGTAACACTGAAGTACCAGCGGAATCGGCTTCGATGCCGCAAATTCCCCGGAATGTGGGGGAGATCTTGCAATCAACCAATTTGAAGAGCTTTACTTCTACTGAACTTCAGGCTGCAACTAGAAATTTCTGTGTAGACAATATCTTAGGACATAGTGTTTTTAAGGGTTGGATTGGTGAACACTCATCTTCTGCTGCCAAACCTGGCAAAGGCATTGCTGCTGCTGTCAAAAGACTTTACAAGGATGACTTCAAAGGTCACAAGGAGTTGTTTGCTGAAGTGAACAATTTAGGCCAGCTTTCTCATCCTCATCTAATCAAATTGATTGGGTATTGCCTTGAAGATGACAACAGCCTTCTTGTGTATGAATTTATGCCTCGCGGCAACTTGGAGAATCACTTGTTCATTAGAGGCTCATATTTTCAACCTCTTTCTTGGAGCCTACGTTTGAAGGTTGCTCTTGGTGCTGCCAAAGGCCTTGCATTTCTTCACAGTGCTCAAACAAAAGTGATATACCGTGATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCAAATTTTGGTCTGGCAAAGGACTTATCGACGGCCGATAAAAGTCATGTTGCCACCAAGCTAACCTACGGATATGCGGCCCCGGAATACCTAGGCACAGGTAACCACACTGCCAAGAGTGATGTGTATAGTTTTGGAGTTGTACTACTGGAAATATTATCAGGGAGGAGAGTTGTTGACAAGAATAGACCACAAAGACAACAAAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCGTAAGATTTTGCGCGTGTTAGATAGCCGTCTTGAAGGCCAATATGAAATAGAAGATGCCTATAAAGTTGCTACACTCTCCCTACAGTGCCTTGCAACAGAAGCCAAGTTGAGACCAAACATGGATGAGGTTGTTACAAATTTGGAGCAGTTGCAGGTTCAAGGTGTAAATGGATGCAATCAGAATCGTTTGCGTAGAAGAAGTGCTGATGATGTTATCCATGTTAGAACAGCCACAGCTTATCCCCAACGCTCTGCTTCTATGCTCTGTACATGA 1254 0.4242 MGISIVSAMGVCLGGQIKAEGPTNSVSRLSTKNVKGDTEDVGSLCCKVSVDLSNSSNTEVPAESASMPQIPRNVGEILQSTNLKSFTSTELQAATRNFCVDNILGHSVFKGWIGEHSSSAAKPGKGIAAAVKRLYKDDFKGHKELFAEVNNLGQLSHPHLIKLIGYCLEDDNSLLVYEFMPRGNLENHLFIRGSYFQPLSWSLRLKVALGAAKGLAFLHSAQTKVIYRDFKTSNVLLDSNYNAKLSNFGLAKDLSTADKSHVATKLTYGYAAPEYLGTGNHTAKSDVYSFGVVLLEILSGRRVVDKNRPQRQQNLVEWAKPYLSNKRKILRVLDSRLEGQYEIEDAYKVATLSLQCLATEAKLRPNMDEVVTNLEQLQVQGVNGCNQNRLRRRSADDVIHVRTATAYPQRSASMLCT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2279 417 ProSiteProfiles Protein kinase domain profile. 98 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2279 417 SUPERFAMILY Protein kinase-like (PK-like) 79 378 IPR011009 -
Mal7g2279 417 Gene3D Phosphorylase Kinase; domain 1 74 179 - -
Mal7g2279 417 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 55 397 - -
Mal7g2279 417 Gene3D Transferase(Phosphotransferase) domain 1 180 398 - -
Mal7g2279 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Mal7g2279 417 Pfam Protein tyrosine and serine/threonine kinase 121 374 IPR001245 GO:0004672|GO:0006468
Mal7g2279 417 PANTHER OS01G0588500 PROTEIN-RELATED 55 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2279 Mal-Chr7 80648604 80650542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2279 47 374 Glycoside Hydrolase AT3G07070 42.120 9.62e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal7g2279 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2279 - - mtr:MTR_4g063930 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2279 7 80648604 80650542 Mal7g2279 7 80648604 80650542 ECH