Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2278 ATGGGAATAAGTATTATTTCAGCCATGGGAGTTTGTTTAGGCGCCCAAGTCAAAGCTGAAAACGCAATTAATTCAGTTTCAGGATTAAGTTCAAAGAGTGTGAATGTCAATACAGAAGATCTCAGTAGCTCAAAGAATACTGAGGCACCAACGGTATCGGTATCGGTGCCTCGGACTGCTCAGGGTGTGGAGGAGATCTTGCAATCATCCAATTTGAAATGTTTTACTTTGACAGAACTTCAGGCTGCAACTAGAAATTTTCGTGTAGATAGTGTGTTAGGAGATGGTGATTTTGGATCAGTTTTTAAGGGTTGGATTGATGAACATTCACCTTCTGCTGCCAAACCTGGCACAGGCATTGCTGTTGCTGTTAAAAGACTTAACCAAGACGGTTTCAAAGGCCGCAGCGAGTTGATGGCTGAAGTCAATTATCTGGGCCAGCTTTCACATCCTCATCTAGTGAAATTGATTGGTTATTGTCTTGAAGATGAAAACAGCCTTTTGGTCTATGAATTTATGCCACGTGGCAGCTTGGAGAATCACTTGTTCATCAGAGGCTCATATTTTCAACCTCTTTCTTGGAGCCTACGTTTGAAGGTTGCTCTCGGTGCCGCCAAAGGCCTTGCATTCCTTCACTGTGCTGAAACGAAAGCAAAATACCGAAATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTCGGGCTGGCAAAGGGCGGGTCCAGGGTTGATAAAAGTCACGTCTCCACCAGGCTAACCTACGGATATGCAGCACCAGAATACCTAGCAACCGGTAATCACACGGCAAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGGAGAAGAGTTGTTGACAAGAATAGACCACCAAGGCAAAACAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCATAAAATTTTGCGCGTGTTGGATAATCGCCTTGAAGGCCAATATGAATTAGACGATGCGTATAAAGTTGCTACACTCTCCCTAAGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGATGAGGTTGTTACAATTTTGGAGCAGTTGCAGGTTCAAGATGTAAATGGATGCAATCAGAATCGTTCACGTAGAAGAAGTGCTGACGATGTTACCCATGTTAGAACAGCCACAGCTTATCCCCAACGCTCTGCCTCTATGTTCAATGAAAGTTAA 1236 0.4239 MGISIISAMGVCLGAQVKAENAINSVSGLSSKSVNVNTEDLSSSKNTEAPTVSVSVPRTAQGVEEILQSSNLKCFTLTELQAATRNFRVDSVLGDGDFGSVFKGWIDEHSPSAAKPGTGIAVAVKRLNQDGFKGRSELMAEVNYLGQLSHPHLVKLIGYCLEDENSLLVYEFMPRGSLENHLFIRGSYFQPLSWSLRLKVALGAAKGLAFLHCAETKAKYRNFKTSNVLLDSNYNAKLSNFGLAKGGSRVDKSHVSTRLTYGYAAPEYLATGNHTAKSDVYSFGVVLLEILSGRRVVDKNRPPRQNNLVEWAKPYLSNKHKILRVLDNRLEGQYELDDAYKVATLSLRCLSIEAKLRPNMDEVVTILEQLQVQDVNGCNQNRSRRRSADDVTHVRTATAYPQRSASMFNES* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2278 411 Gene3D Transferase(Phosphotransferase) domain 1 173 395 - -
Mal7g2278 411 SUPERFAMILY Protein kinase-like (PK-like) 59 367 IPR011009 -
Mal7g2278 411 Coils Coil 408 411 - -
Mal7g2278 411 ProSiteProfiles Protein kinase domain profile. 87 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2278 411 PANTHER OS01G0588500 PROTEIN-RELATED 41 391 - -
Mal7g2278 411 ProSitePatterns Protein kinases ATP-binding region signature. 93 125 IPR017441 GO:0005524
Mal7g2278 411 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 41 391 - -
Mal7g2278 411 Gene3D Phosphorylase Kinase; domain 1 62 172 - -
Mal7g2278 411 Pfam Protein tyrosine and serine/threonine kinase 89 366 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2278 Mal-Chr7 80644929 80647239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2278 64 367 Glycoside Hydrolase AT3G07070 46.254 1.53e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal7g2278 PK_Tyr_Ser-Thr 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2278 - - mtr:MTR_4g063930 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0555 4 5408785 5411348 Mal7g2278 7 80644929 80647239 PCT