Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2268 ATGGAGGGAACTTGCTCATCCTCTACAACACATGATGATTATCAAACTTTAGTAGATGATTTCGACTTCTTCGTCCTTCATGATCACGCTGAAGAAATAGTTCCAATATCTGATGAGAAATATGCAAAGAAAATCCAAGTAGTGGATGCAAAAACTTTTGAAGCGGAATCTTCTTCTCAATTGAAACAATCCTATTGTGCTATCTGTATGGAAGCTAAACCTGTTGAAGAAATGTTCGAAAATCAAATCTGTTCACACTCTTTTTGTGAAGATTGTGTTGGAAGATATCTAGCTGCAAAAATTCAAGACAATATAGCAATGGTAAAGTGTCCTTATCCAAATTGCAATGGTATTTTGGAGCCTCATAATTGTAGTACCCTTATACCAAAGGATGTGTTTGAGAGATGGGGAAAGGCACTTTGTGAGAATTTGGTGTTAGATTCACAAAAATTTTATTGTCCTTATAATGATTGTTCAGCTATGTTGGTGAATGATGAAAATGAAGTTGTGACTAGTTCAGAATGTCCACATTGCCATAGATTGTTCTGTGCACAATGTAAAGTTTCATGGCATTCAGGTGTTGATTGTAAAGAGTTTCAAAGCTTGGAAGACGGCGAGCGACGGAGGGAAGATCTAATGACCATGGAACTTGCTAAGAGCAAGAGATGGAAAAGATGTCCAAAATGCAGCTTCTATGTGGAAAGAACTGAGGGATGTACTCGCATGTCATGCAGGTGTGGGAATCAATTTTGCTATGGCTGTGGATCCATTTGGAGTGATGACTCCCATTATAAATGTGTAAGTTGA 807 0.3779 MEGTCSSSTTHDDYQTLVDDFDFFVLHDHAEEIVPISDEKYAKKIQVVDAKTFEAESSSQLKQSYCAICMEAKPVEEMFENQICSHSFCEDCVGRYLAAKIQDNIAMVKCPYPNCNGILEPHNCSTLIPKDVFERWGKALCENLVLDSQKFYCPYNDCSAMLVNDENEVVTSSECPHCHRLFCAQCKVSWHSGVDCKEFQSLEDGERRREDLMTMELAKSKRWKRCPKCSFYVERTEGCTRMSCRCGNQFCYGCGSIWSDDSHYKCVS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2268 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 146 IPR013083 -
Mal7g2268 268 SMART ibrneu5 207 266 IPR002867 -
Mal7g2268 268 SMART ibrneu5 134 196 IPR002867 -
Mal7g2268 268 SUPERFAMILY RING/U-box 207 266 - -
Mal7g2268 268 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 17 266 - -
Mal7g2268 268 Gene3D - 193 268 - -
Mal7g2268 268 SUPERFAMILY RING/U-box 140 200 - -
Mal7g2268 268 ProSitePatterns Zinc finger RING-type signature. 84 93 IPR017907 -
Mal7g2268 268 ProSiteProfiles Zinc finger RING-type profile. 66 114 IPR001841 -
Mal7g2268 268 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 17 266 IPR031127 GO:0004842|GO:0016567
Mal7g2268 268 SUPERFAMILY RING/U-box 63 143 - -
Mal7g2268 268 ProSiteProfiles TRIAD supradomain profile. 62 268 IPR044066 -
Mal7g2268 268 Pfam IBR domain, a half RING-finger domain 214 263 IPR002867 -
Mal7g2268 268 Pfam IBR domain, a half RING-finger domain 138 196 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2268 Mal-Chr7 80391386 80392410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2268 66 256 C3H Transcription Factor Family AT2G19610 29.268 7.54e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2268 K11975 - gmx:100815626 349.747