Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2260 ATGGAGAGTGGTGAGAATAATGAGATTAATGAAGAAGGGTCGAATGGTAATAATATTTCATCAAGTTCACGATGGAACCCAACAAAAGAACAAATAAGTATGTTAGAGAATTTGTATAAGCAAGGAATAAAGACACCAAGTGCTGAGGAAATACAAGAGATAACTGCAAGGCTAAGAGTGTATGGTCACATCGAAGGAAAGAATGTCTTTTACTGGTTTCAGAATCACAAAGCTAGACAGAGACAGAAACAGAAGCAAGAAAGTATTGCTTATTTCAATCGACTTCTTCATAGACCTCACCCCATTTTTCCTTCACCTATTTGTCCAAATGGTGAGTCAGTTCTCATCTTCCTTTTTCTATCATATAAATTCTACATATACACTATTCTATTTTCATTTTTTGTTGTTTATATTGTTCATGATAATTTTTTCTTTATCAATATGCGCATGTCAAATAAATCTTTCATATTGTTTGATCAATGGCCAATATGTCTCTGCATGAAAATGTGTTTGTTATGTATTAATCAAAAAGGTTAA 537 0.324 MESGENNEINEEGSNGNNISSSSRWNPTKEQISMLENLYKQGIKTPSAEEIQEITARLRVYGHIEGKNVFYWFQNHKARQRQKQKQESIAYFNRLLHRPHPIFPSPICPNGESVLIFLFLSYKFYIYTILFSFFVVYIVHDNFFFINMRMSNKSFILFDQWPICLCMKMCLLCINQKG* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2260 178 CDD homeodomain 24 84 IPR001356 GO:0003677
Mal7g2260 178 ProSiteProfiles 'Homeobox' domain profile. 18 83 IPR001356 GO:0003677
Mal7g2260 178 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 7 111 IPR044555 GO:0003700|GO:0099402
Mal7g2260 178 MobiDBLite consensus disorder prediction 1 25 - -
Mal7g2260 178 Gene3D - 22 90 - -
Mal7g2260 178 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 7 111 - -
Mal7g2260 178 MobiDBLite consensus disorder prediction 8 25 - -
Mal7g2260 178 SUPERFAMILY Homeodomain-like 22 91 IPR009057 -
Mal7g2260 178 Pfam Homeodomain 22 82 IPR001356 GO:0003677
Mal7g2260 178 SMART HOX_1 20 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2260 Mal-Chr7 80234161 80234697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2260 7 110 Wox Gene Family AT5G59340 69.231 3.93e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal7g2260 Homeodomain 2.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2260 - - pvu:PHAVU_011G064900g 179.874