Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2242 ATGCGCATAGCCACCATAGCGAATAGTAGAACTCTTCTTCCCCAAAATTCAGCTTCACCCTTACCCCAATTATTGCTATGCGTACGCCATCATTCATCTACCAAATTATTCATCGCAGGGCTTTCCTATAATACGAATGAAACTGTCCTGAGAGACACCTTTGAACAACATGGCCAAATCATTGAAGTTAAAGTAATATGTGACCACAAAACTGGGGAATCAAAAGGGTACGGATTTGTCAGGTTCAATTCTGAAACTGCTGCTGCCACAGCTCGCAAAGAATTGCACGGCCAGATAGTGGATGGAAGACGCATTCGAGTGGGTTATGCGCACAAAGGGTACTACCAAGTCTGTCAAACAATTCACAAGACTCCAGCAGCTACAACAAATCCATAA 396 0.4343 MRIATIANSRTLLPQNSASPLPQLLLCVRHHSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICDHKTGESKGYGFVRFNSETAAATARKELHGQIVDGRRIRVGYAHKGYYQVCQTIHKTPAATTNP* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2242 131 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Mal7g2242 131 Gene3D - 9 115 IPR012677 -
Mal7g2242 131 SMART rrm1_1 35 108 IPR000504 GO:0003723
Mal7g2242 131 PANTHER GLYCINE-RICH RNA-BINDING-LIKE PROTEIN-RELATED 10 112 - -
Mal7g2242 131 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 10 112 - -
Mal7g2242 131 SUPERFAMILY RNA-binding domain, RBD 18 112 IPR035979 GO:0003676
Mal7g2242 131 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2242 Mal-Chr7 79731629 79732578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2242 34 112 Eukaryotic Initiation Factors Gene Family AT3G16380 41.772 2.22e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2242 K13195 - gmx:100306540 150.984