Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2241 ATGTCTGCAGCTCTCGATATGACCCTCGATGATATCATCAAGAACAACAAAAAATCTGGATCCGGAAACCCTAGAGGTGGCCGTTCCAGACCCGGACCCGGTTCCGGACCTGGACCCGCTCGCCGTATCCCTAACCGTGCCGGTAACCGTGCTGCACCTTACTCCGCCGCTAAGGCTCCGGAGACAGCGTGGCAGCATGATTTGTATGCAGATCAGCATGTAGCTGCGGCGGCGTATCCAGCAGCTCAAGGTGGTCGTGCGCCTTCTATTGAAACTGGAACCAAGCTCTATATATCTAATTTGGATTATGGTGTTTCCAATGATGATATTAAGGAATTGTTTTCTGAAGTTGGTGACTTGAAACGGCACGGCGTTCATTATGACAGGAGTGGCAGATCGAAGGGTACCGCAGAAGTAGTCTTCTCAAGGCGACAAGATGCTGTAGCTGCTGTGAAGAGATACAACAATGTTCAACTAGATGGGAAACCAATGAAGATAGAGATTGTTGGAACCAACATTTCTACACCTGGTGCGGCTCCTGTTGTAAATGCAGCCATTGGAAATTTTAATGGAATTCCTCAAAGTGGGCAAGGCAGAGTTGGAGAATTCCGAGGGCCGGGAGGAAGAGGTCAAGGCATTCGAAGAAATCGAGGACGTGGAAGAGCTAGCGGTGGAGGTCGTGGTGGTGGTCGCGGTGGAGGTCGCGGTAGAGGCCGCGACGAAAAGGTATCTGCAGAAGATCTAGATGCTGAGCTGGAGAAGTATCATGCAGAGGCCATGCAATTAAACTAA 792 0.5038 MSAALDMTLDDIIKNNKKSGSGNPRGGRSRPGPGSGPGPARRIPNRAGNRAAPYSAAKAPETAWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGAAPVVNAAIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRASGGGRGGGRGGGRGRGRDEKVSAEDLDAELEKYHAEAMQLN* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2241 263 SMART FoP_duplication_2 193 263 IPR025715 -
Mal7g2241 263 PANTHER CHROMATIN TARGET OF PRMT1 PROTEIN-RELATED 1 262 - -
Mal7g2241 263 MobiDBLite consensus disorder prediction 196 248 - -
Mal7g2241 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 171 IPR000504 GO:0003723
Mal7g2241 263 SUPERFAMILY RNA-binding domain, RBD 27 168 IPR035979 GO:0003676
Mal7g2241 263 CDD RRM_THOC4 94 168 - -
Mal7g2241 263 MobiDBLite consensus disorder prediction 233 248 - -
Mal7g2241 263 MobiDBLite consensus disorder prediction 1 58 - -
Mal7g2241 263 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 1 262 - -
Mal7g2241 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 164 IPR000504 GO:0003723
Mal7g2241 263 Pfam C-terminal duplication domain of Friend of PRMT1 207 257 IPR025715 -
Mal7g2241 263 Gene3D - 77 246 IPR012677 -
Mal7g2241 263 SMART rrm1_1 95 167 IPR000504 GO:0003723
Mal7g2241 263 Coils Coil 245 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2241 Mal-Chr7 79724025 79726384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2241 93 196 Eukaryotic Initiation Factors Gene Family AT1G71770 28.205 4.01e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2241 K12881 - gmx:100775827 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2241 7 79724025 79726384 Mal7g2241 7 79724025 79726384 ECH