Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2230 ATGCTAATATCCAAAGTTGATGAAAACTACACCAACCAATCCAAAGATGAAGTTTTGAAGAATGGTGATTATAAGTGCAAGACATGTAATAAGCAATTTCTTTCATTTCAAGCTCTTGGGGGACATAGGGCTAGCCACAAAAAGCTCAAGCTAAACTCTACCATGAAACCAAACTCTACCATGAAACCCAAGATGCATATGTGTCCAATTTGTGGGCTTCAATTTGCTATTGGACAAGCACTTGGAGGGCACATGAGAAAGCATAGAGCAAGCCAAATTCATGATCATGATAGCCCTATATCTCATGGTCCTAAAAGGTTGCGTTTGTCCTTGGATTTGAACTTGACACCCTATGAAAATGATCTTAAGTACCTTAATTACTTCTTTTTTGAGGCATTAAGTACCTTCACTTAA 414 0.3792 MLISKVDENYTNQSKDEVLKNGDYKCKTCNKQFLSFQALGGHRASHKKLKLNSTMKPNSTMKPKMHMCPICGLQFAIGQALGGHMRKHRASQIHDHDSPISHGPKRLRLSLDLNLTPYENDLKYLNYFFFEALSTFT* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2230 137 PANTHER ZINC FINGER PROTEIN ZAT12 1 123 - -
Mal7g2230 137 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 99 IPR013087 -
Mal7g2230 137 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Mal7g2230 137 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Mal7g2230 137 Pfam C2H2-type zinc finger 66 90 - -
Mal7g2230 137 Pfam C2H2-type zinc finger 24 48 - -
Mal7g2230 137 Gene3D Classic Zinc Finger 21 88 - -
Mal7g2230 137 SUPERFAMILY beta-beta-alpha zinc fingers 24 88 IPR036236 -
Mal7g2230 137 PANTHER ZINC FINGER PROTEIN ZAT5 1 123 - -
Mal7g2230 137 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Mal7g2230 137 SMART c2h2final6 24 46 IPR013087 -
Mal7g2230 137 SMART c2h2final6 66 88 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2230 Mal-Chr7 79458761 79459174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2230 1 130 C2H2 Transcription Factor Family AT2G28710 45.205 1.19e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g2230 zf-C2H2_6 3.9e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2230 - - gmx:112998408 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0581 4 5780119 5780460 Mal7g2230 7 79458761 79459174 PCT