Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2223 ATGGTTGAACAGGAAATAAGCAGAAAAGGTCCATGGACAGAACAAGAAGATTACAAATTGGCATATTTTGTAGGCTTATTTGGTGATCGTAGATGGGATTTTATAGCAAAGGTTTCAGGTTTGAGTAGATCAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTATCTTCACCCTGATCTCAAACGTGGCAAGATGACACCCCAAGAAGAAAGACTTGTTATGGAACTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTAGAAAACTACCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACACACATGAGAAAAAAGAGGGCACAAGAGAAGAAACACGCGACACCTTCGATTTCATCATCACGTGATCAATCTTCTAGTTGTCAATCTTCACATTTCTCAAATAATAACCATGTTGTGGATTCACATGCTTCCAACAAAGAGGTTGAAGAAGAAAATTACCAAGTCCAAGAAATTGAACAGGGGTACTCAATGGATGATATATGGAAAGATATTGCTATGTCTGAAGATGACATTAATATTCTTCAACCTGTTTATGATGCAACTAGTGAAGAGAATTGCAATAACTTTTCTTGTCCTATAATACCTTCTACATCATCATGGGATTATTCTAATTTAGATCCATTGTGGGTGATGGATGAAGAAGAAAGCAAGATGTTATTCCCCCCTATTGGTGACCAATATTTTTCCTTCTATGATCAACAAGGGAACACATTTCTAACTGGTTAA 762 0.3701 MVEQEISRKGPWTEQEDYKLAYFVGLFGDRRWDFIAKVSGLSRSGKSCRLRWVNYLHPDLKRGKMTPQEERLVMELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSRDQSSSCQSSHFSNNNHVVDSHASNKEVEEENYQVQEIEQGYSMDDIWKDIAMSEDDINILQPVYDATSEENCNNFSCPIIPSTSSWDYSNLDPLWVMDEEESKMLFPPIGDQYFSFYDQQGNTFLTG* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2223 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 56 IPR017930 -
Mal7g2223 253 SMART sant 8 58 IPR001005 -
Mal7g2223 253 SMART sant 61 109 IPR001005 -
Mal7g2223 253 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
Mal7g2223 253 CDD SANT 64 107 IPR001005 -
Mal7g2223 253 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Mal7g2223 253 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Mal7g2223 253 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 234 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal7g2223 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Mal7g2223 253 CDD SANT 11 56 IPR001005 -
Mal7g2223 253 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Mal7g2223 253 Gene3D - 65 108 - -
Mal7g2223 253 MobiDBLite consensus disorder prediction 106 157 - -
Mal7g2223 253 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mal7g2223 253 Gene3D - 9 61 - -
Mal7g2223 253 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 4 234 - -
Mal7g2223 253 MobiDBLite consensus disorder prediction 122 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2223 Mal-Chr7 79340017 79341470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2223 4 230 MYB Transcription Factor Family AT5G59780 58.772 2.35e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g2223 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2223 K09422 - gmx:100776886 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2223 7 79340017 79341470 Mal7g2223 7 79340017 79341470 ECH
Mal7g2223 7 79340017 79341470 Mal4g0587 4 5872881 5873921 PCT