Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2197 ATGATGTCTGAAGAAAAACATGATGATAGTGATTGTCATTTGGAGGTTCTTAAAGATTATACTTCTATATGTGTAGATGATGATTATATAAATTCTTTAACATTTCAAGAGCCACAGAATGAACCCTTGCCTCAAGTCAATAACATTGATGAGTTGGTTCCTTTTGAAGGGAAAATATTTAACACTGATGGTGATGCTTACGAATTTTATTCTTCATTTGCACGAAAAAATGGATTTTTGATTAGGCGTGATCACATTTACAAATCTTGTAAAAAAGAGTCTGAGAAGAACCCATCTGGTATTTATGAAAGGGAATTTGTTTGTCATCGTGGTGGTATTGTTAAACAATGCAAGGTTAATGAAGGGGAAAGTCAGAGGAAACGAAAATCTTCAAAATGTCATTGTGGTGCAAAGATGTTGGTTGCTATAAAAACAATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTAAACAATCATCACAATCATGAGTTATTGGATGACAAAGAGGTTCAATTTCTTCCGGCGTATCGTAACATCCCAATTGTTGATCAAAGTCGTATCCTATTGTTGTCGAAAGCTGGTTGCTCTATAAGTCTTATTGTGAGAGTGCTTGAGTTACAGAATGGAATAATTACAGGTAACCTACCTTTTTTAGATAAAGATATTCGAAATTTTATTCAATCCCAGAGTAATATTGATATTGATGACACCTTCAAATATGAGTTCACTATTGATGAAAGTAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAGTTCGAGCATACGAATCTTTTGGAGATGTTGTAGTTTTTGATACCACATATAGAATAAATCGTTATGATATGCCACTTGGAATATGGGTTGGAAAATATCCAAAAACTATTCTTACGGATCAAGATCTCGCACTTAAGGAAGCCATTAAAATGGAATTGCCAAACACAAAGCATGCATTTTGCATATGGCATATTGTAGCAAAATTGTCAAGTTGGTTTTCTTCTGCACTGGGTTCGAAATATAATGACTTTAAACAAGAGTTTCACAAGGTTGGTGTTGCTGTCAAAATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCACAATCCTCACATTAGAACATGTTTTCCTATTGAGGAACATGTTGCATCTGTACTTACACCGTATGCCTTTAAGTTGCTCCAACATGAGATTGAATTATCTACAAAATATGCAGCAACTGAAATTGAAAATGGCTCTTATATTGTGCAACATCATACCAAAGTTGATGGTGGGCGTCAAAATTTCAATTTTCTAGAATATTATGCAGACATGCTATTCGAGTGCTAA 1344 0.3423 MMSEEKHDDSDCHLEVLKDYTSICVDDDYINSLTFQEPQNEPLPQVNNIDELVPFEGKIFNTDGDAYEFYSSFARKNGFLIRRDHIYKSCKKESEKNPSGIYEREFVCHRGGIVKQCKVNEGESQRKRKSSKCHCGAKMLVAIKTIGFEEKWVVKYLNNHHNHELLDDKEVQFLPAYRNIPIVDQSRILLLSKAGCSISLIVRVLELQNGIITGNLPFLDKDIRNFIQSQSNIDIDDTFKYEFTIDESNKLEHIIWAFGDSVRAYESFGDVVVFDTTYRINRYDMPLGIWVGKYPKTILTDQDLALKEAIKMELPNTKHAFCIWHIVAKLSSWFSSALGSKYNDFKQEFHKVGVAVKIRNQAGEEARMRQKYHNPHIRTCFPIEEHVASVLTPYAFKLLQHEIELSTKYAATEIENGSYIVQHHTKVDGGRQNFNFLEYYADMLFEC* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2197 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 293 IPR031052 GO:0006355
Mal7g2197 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 356 431 IPR031052 GO:0006355
Mal7g2197 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 292 351 IPR031052 GO:0006355
Mal7g2197 447 Pfam MULE transposase domain 293 328 IPR018289 -
Mal7g2197 447 Pfam FAR1 DNA-binding domain 68 166 IPR004330 -
Mal7g2197 447 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 356 431 - -
Mal7g2197 447 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 292 351 - -
Mal7g2197 447 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 51 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2197 Mal-Chr7 78236789 78243261 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal7g2197 FAR1 2.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2197 - - ccaj:109802755 593.578