Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2176 ATGGAACCATTTTCAAGAGACCACCGTGGCTCACTTGAAGTTTTCAATCCATCTTCATCTGACAACAACAACGACGAGAATTCAAATTCAAATCCAAATCCAAATTCAGTCAATTCATGGAACACCTGGACAACAAACTCACGCGTCAACGAAACTCCACAACAACCGACGCGTGACTCCATCAACTCTGATGAAGTCACGGTCACAACCTCGTGGATGGCACTCAAAGACCCCTCACCTCCGTCAGTTTCCAGCCAGCCCGGCTCCGCTGCTGCTCAGAGAGCAGCGGAGTGGGGGTTAGTGCTGAAAACTGATTCGGAGACAGGGAAGCCGCAGGGAGTGGCGGTTAGAAGCTCCGGTGGTGGTGGTTCAAGGAGGGACTCGAATAATTCGATGAGAAGCTCCGGTGAGAGTTCCGATGACGGAAGGGAGGGTAGGGGAATACCGAGAGTTTCAGAGGATTTGAGAGATGCTCTATCGGCCTTTCAACAGACATTTGTGGTTTCGGATGCTACTAAACCGGATTACCCGATTATGTATGCTAGTGCTGGATTTTTTAATATGACGGGGTATACTTCCAAAGAGGTCATTGGAAGAAACTGTCGATTTATGCAAGGAGCTGACACGGATCCAAATGATGTGGCAAAGATAAGAGAATCACTAGCAGCAGGAACAACTTATTGTGGAAGGTTACTAAATTACAAGAAAGATGGGACACCATTTTGGAACCTTCTTACTATTGCCCCTATCAAGGACGAACATGGCAAAATCCTCAAACTTATCGGAATGCAAGTGGAGGTTAGCAAGCATACTGAGGGGACCAAGGAGAAGATGCTACGTCCCAATGGATTGCCTGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAAACTCATCAGTAACTGAGTTGGTGGAAGCAGTGAGCAGAAGACCAAGGTCACTCAGTGAATCAACAAACCGTCTTCCCTTCATCAAAGTTCCAACAACAGTAGTACGTGGTGATCATCATGCAAAACAAGTACAAAAAACACCATCAAGAAGAAAATCTGAGAGTACTTTACCTTCATTTAGACGAAAATCACATTCTGGAGGACGAGGAGATACTAATTTTAATTCAATGCATCCCATCACTGAGACCCCTGAAAACAAAATCAACTCGCGCCGCCGTTCTTTCATGGGGTTCATCAGGAAAAGTATGTCAAACAATGAAAGCTTCAATGATGAACAACTTGCTGATGATGAGGATAGCTCTGAGGATGATGAAAGGCCTAATAGTGTTGATGAAAAAATTAAAAAGAGAGAAAAGAGAAAGGGTCTTGATCTTGCTACCACGCTTGAACGTATCGAGAAGAACTTTGTCATTACTGATCCTAGGCTCCCTGATAACCCTATTATCTTTGCATCCGATAGCTTCTTAGAGCTTACGGAGTATTCTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCTGCAACAGTGAAAAAAATTAGACAGGCTATTGACAATCAAACAGAAGTTACTGTGCAGCTTATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACCTGTTCCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAACCTCTTCACAACCGCATTGCAGAAGATACAGCAAAAGAAGGAGAAAATTTGGTAAAGAAAACAGCAGAAAATGTTGATGATGCATTGAGAGAACTCCCAGATGCTAACATGAAACCAGAAGATCTATGGATGAATCATTCAAAAGTGGTTCACCCTAAACCTCATAGGAGGGATGATGCTGCTTGGAGAGCTATTCAGAAGATCATGGAGAGTGGAGAACAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGGTCAGGAGACACTGGCAGTGTCCATCTGGTTGAGCTATGTGGAACTGATCAACATTTTGCCATGAAGGCTATGGAGAAGGCTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAAAGAGAAATCCTAGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAAACACATATTTGTTTGATAACCGATTACTGTCCTGGAGGAGAACTGTTCCTGCTGCTCGAACGCCAGCCAGCAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTATGCCTCTGAAGTGGTTACTGCATTGGAGTACCTTCATTGTCAAGGGATAATATATAGGGATTTGAAGCCGGAAAATGTGTTACTACAGAGCAGTGGACATGTGGCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGCTTTTAATTTCAACTACAAATGACAAGAAGAAAGGACAACAGGCTCCAATATTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTCGGCACAGAAGAGTACATAGCTCCGGAAATTATTACTGGTTCTGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGATTTATGGATATACACCATTCAGGGGAAAGAATAGGCAAAGAACATTTGCAAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGGTTAGTCTCAGTGCAAAGCAGTTAATTTATCGCTTGTTGCAAAGAGATCCAACTAGCAGGTTGGGTTCAAATGGAGGAGCAAATGATATCAAAAACCATCCCTTCTTCAGGGGTATCAACTGGGCCCTTGTCCGATGCACGAAACCTCCTGAACTTGATGCTCCTCTCTTTGATACAAATGAAGAAGAAAAGGGAAAGGAAAAGGAAGACAAATATGTAGATAATGGACAAGAGGATATGAGTGTCTTCTGA 2919 0.4262 MEPFSRDHRGSLEVFNPSSSDNNNDENSNSNPNPNSVNSWNTWTTNSRVNETPQQPTRDSINSDEVTVTTSWMALKDPSPPSVSSQPGSAAAQRAAEWGLVLKTDSETGKPQGVAVRSSGGGGSRRDSNNSMRSSGESSDDGREGRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIRESLAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVTELVEAVSRRPRSLSESTNRLPFIKVPTTVVRGDHHAKQVQKTPSRRKSESTLPSFRRKSHSGGRGDTNFNSMHPITETPENKINSRRRSFMGFIRKSMSNNESFNDEQLADDEDSSEDDERPNSVDEKIKKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRQAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVHPKPHRRDDAAWRAIQKIMESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTDQHFAMKAMEKAVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVRFYASEVVTALEYLHCQGIIYRDLKPENVLLQSSGHVALTDFDLSCLTSCKPQLLISTTNDKKKGQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMIYGYTPFRGKNRQRTFANILHKDLKFPKSKQVSLSAKQLIYRLLQRDPTSRLGSNGGANDIKNHPFFRGINWALVRCTKPPELDAPLFDTNEEEKGKEKEDKYVDNGQEDMSVF* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2176 972 Coils Coil 572 592 - -
Mal7g2176 972 MobiDBLite consensus disorder prediction 410 424 - -
Mal7g2176 972 SMART pac_2 228 270 IPR001610 -
Mal7g2176 972 SMART pac_2 517 559 IPR001610 -
Mal7g2176 972 Gene3D PAS domain 428 593 - -
Mal7g2176 972 MobiDBLite consensus disorder prediction 405 438 - -
Mal7g2176 972 Gene3D Transferase(Phosphotransferase) domain 1 725 937 - -
Mal7g2176 972 ProSitePatterns Protein kinases ATP-binding region signature. 647 670 IPR017441 GO:0005524
Mal7g2176 972 MobiDBLite consensus disorder prediction 122 136 - -
Mal7g2176 972 Gene3D PAS domain 165 324 - -
Mal7g2176 972 CDD PAS 455 555 IPR000014 -
Mal7g2176 972 MobiDBLite consensus disorder prediction 368 383 - -
Mal7g2176 972 PANTHER FLIPPASE KINASE 1-RELATED 101 965 - -
Mal7g2176 972 MobiDBLite consensus disorder prediction 330 390 - -
Mal7g2176 972 ProSiteProfiles PAS repeat profile. 151 221 IPR000014 -
Mal7g2176 972 PANTHER PHOTOTROPIN-1 101 965 - -
Mal7g2176 972 ProSiteProfiles PAC domain profile. 514 568 IPR000700 -
Mal7g2176 972 SMART serkin_6 641 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2176 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Mal7g2176 972 CDD STKc_phototropin_like 639 944 - -
Mal7g2176 972 SUPERFAMILY PYP-like sensor domain (PAS domain) 172 264 IPR035965 -
Mal7g2176 972 Gene3D Phosphorylase Kinase; domain 1 640 724 - -
Mal7g2176 972 SUPERFAMILY PYP-like sensor domain (PAS domain) 456 555 IPR035965 -
Mal7g2176 972 Pfam PAS domain 463 555 IPR000014 -
Mal7g2176 972 Pfam PAS domain 172 268 IPR000014 -
Mal7g2176 972 MobiDBLite consensus disorder prediction 12 91 - -
Mal7g2176 972 ProSiteProfiles Protein kinase domain profile. 641 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g2176 972 ProSiteProfiles PAS repeat profile. 440 513 IPR000014 -
Mal7g2176 972 SMART pas_2 153 223 IPR000014 -
Mal7g2176 972 SMART pas_2 442 511 IPR000014 -
Mal7g2176 972 ProSiteProfiles PAC domain profile. 225 279 IPR000700 -
Mal7g2176 972 SUPERFAMILY Protein kinase-like (PK-like) 625 944 IPR011009 -
Mal7g2176 972 MobiDBLite consensus disorder prediction 1 149 - -
Mal7g2176 972 MobiDBLite consensus disorder prediction 944 965 - -
Mal7g2176 972 TIGRFAM sensory_box: PAS domain S-box protein 465 555 IPR000014 -
Mal7g2176 972 TIGRFAM sensory_box: PAS domain S-box protein 178 271 IPR000014 -
Mal7g2176 972 CDD PAS 178 267 IPR000014 -
Mal7g2176 972 MobiDBLite consensus disorder prediction 334 367 - -
Mal7g2176 972 MobiDBLite consensus disorder prediction 943 972 - -
Mal7g2176 972 Pfam Protein kinase domain 643 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2176 Mal-Chr7 77690281 77708321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2176 6 969 AGC Kinase Gene Family AT3G45780 69.910 0.0 1358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal7g2176 Pkinase 1.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2176 K20715 - gmx:100804524 1447.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2176 7 77690281 77708321 Mal7g2176 7 77690281 77708321 ECH
Mal4g0609 4 6229919 6243494 Mal7g2176 7 77690281 77708321 PCT