Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2170 ATGTTAGATCTTAATCTAAACGATTCAAACTCAACCGATTCAACTCAGAATCAGAACAACGACTCATCAATGATATCAGAGAAGTTTCCGCAAATGGTGGATGAATCAGGAACATCGAATTCCTCAATCGTCAATGCGGACGGTGACGAAGACTCGTGTTCCACGCGCGTTTTCACTTTCAGTTTCGATATTCTGAAAATGGAAGGTTCGAATTCAAACGACGTCGTAACGAAGGAGTTTTTCCCTGTGAAGTTGCAAGCTACGTCGTCGTCGTCGTCGTTTTCGATGAGAAACGGTTCGGTTGATTTGTCGTTTAATCAGAATGAAGAGATGAAGATTGTTCAAGCGCCACAACCAGCTAAAAAGAGTAGAAGAGGACCTAGGTCTCGAAGTTCGCAATACAGAGGTGTTACGTTTTATCGCAGGACTGGTAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTTTATTTAGGTGGATTTGACACAGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATTAAGTTTAGGGGAGTTAGTGCTGATATAAATTTCAATTTGAATGATTATGATGATGATCTTAAACAGACGAAGAATTTATCGAAAGAGGAATTCGTGCACATACTCCGTCGACAAAGTACTGGTTTCTCAAGAGGGAGTTCAAAGTACAGAGGAGTAACGCTGCATAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGATAAAGCAGCTATTCAAAACAATGGAAGTGAAGCAGTGACTAACTTTGAGCCCTGTACATACGAAGGAGAGATGAAATCCGCAGCCATCAATGACGGTGGCTGTCAAAATCTTGATCTCAATTTGGGCATAGCCACACCAGGAGCTGGTCCCAAAGAAAATCCGGGGCAATTTCACTTCCCCTCTGTCCCTTACACCATGCAAGCTGGAAGAAATTCAAGGATGGAAACCAATGTTTCAGGTATCGGTAATCCATCTTTGAAAAGGCTATTAGTAACTGAAGAACGTCATTCCTTATGGAATGGCATGTATCCTGCTTTCTTTCCCAATGAGGAAACAGCAGATAGTATCAACAAAATTCCTTCAAAAAGACTCCCCAATTGGGCGTGGCAACCTCATGGCCAGGTCACTGCTACCTCAGTGCAACCAATCTCTGCAGCAGCAGCAGCATCATCAGGATTCTCCATTTCAGCTCCCTTTCAATCGACTCCCATATTTCCACCAAGATCGATGAACTCAATTCCCCAGAGTCTCTATTTTACTTCGCCCAAAGCACCTAACAGCAACACATCTCACTACTATTATCAGGTTAAGCCCCCGCAAGCACCACCCTAG 1365 0.4381 MLDLNLNDSNSTDSTQNQNNDSSMISEKFPQMVDESGTSNSSIVNADGDEDSCSTRVFTFSFDILKMEGSNSNDVVTKEFFPVKLQATSSSSSFSMRNGSVDLSFNQNEEMKIVQAPQPAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVSADINFNLNDYDDDLKQTKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIQNNGSEAVTNFEPCTYEGEMKSAAINDGGCQNLDLNLGIATPGAGPKENPGQFHFPSVPYTMQAGRNSRMETNVSGIGNPSLKRLLVTEERHSLWNGMYPAFFPNEETADSINKIPSKRLPNWAWQPHGQVTATSVQPISAAAAASSGFSISAPFQSTPIFPPRSMNSIPQSLYFTSPKAPNSNTSHYYYQVKPPQAPP* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2170 454 CDD AP2 133 188 IPR001471 GO:0003700|GO:0006355
Mal7g2170 454 SUPERFAMILY DNA-binding domain 224 267 IPR016177 GO:0003677
Mal7g2170 454 MobiDBLite consensus disorder prediction 433 454 - -
Mal7g2170 454 ProSiteProfiles AP2/ERF domain profile. 133 189 IPR001471 GO:0003700|GO:0006355
Mal7g2170 454 MobiDBLite consensus disorder prediction 1 23 - -
Mal7g2170 454 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 416 - -
Mal7g2170 454 CDD AP2 224 267 IPR001471 GO:0003700|GO:0006355
Mal7g2170 454 MobiDBLite consensus disorder prediction 112 134 - -
Mal7g2170 454 Pfam AP2 domain 133 181 IPR001471 GO:0003700|GO:0006355
Mal7g2170 454 SMART rav1_2 133 195 IPR001471 GO:0003700|GO:0006355
Mal7g2170 454 SMART rav1_2 225 273 IPR001471 GO:0003700|GO:0006355
Mal7g2170 454 Gene3D AP2/ERF domain 132 191 IPR036955 GO:0003700|GO:0006355
Mal7g2170 454 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 416 - -
Mal7g2170 454 SUPERFAMILY DNA-binding domain 132 190 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2170 Mal-Chr7 77480454 77483997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2170 1 454 AP2-EREBP Transcription Factor Family AT5G60120 44.646 4.62e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g2170 AP2 6.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2170 K09284 - gmx:100788303 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2170 7 77480454 77483997 Mal7g2170 7 77480454 77483997 ECH
Mal4g0734 4 8200641 8204433 Mal7g2170 7 77480454 77483997 PCT