Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2153 ATGGAGAGTACTACTAGTGACACTTCTTGTGCTCCATTTTCTCACAATTCTCAAGTTATTGTTATGAGTCCTTGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTAGTGCTGATAAATGTGTTTTAGCACCTTATTTTCCTCCTACTGACCCTGCCAAGTTTACCATTGCTCATAGAGTTTTTGGTGCTAGCAACATCATCAAATTCTTACAGGAACTTCCAGAAGCTCAAAGAGCTGATGCAGTGACAAGCATGGTTTATGAGGCTAGTGCAAGAATTAGAGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCACAATTAGCCAAATCACAAGCTGAGGTTGTAAACATGCAACTCCAACAAGCCAATCTTGTAGCTTTAATTTGCATGGAAATGTCACAAAAGCAAGAATCACCACAAGAAATATCAGTGGATGATTTCATTGAAAGTCCTCCCCATAGCAATGGATATCAAATCGGTTTGAACTTTCTTGATGAGAACACTAGCCTTAACTCATCGTGGGATCCACTTTGGACATGA 573 0.4031 MESTTSDTSCAPFSHNSQVIVMSPCAACKILRRRCSADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPEAQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKSQAEVVNMQLQQANLVALICMEMSQKQESPQEISVDDFIESPPHSNGYQIGLNFLDENTSLNSSWDPLWT* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2153 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 187 - -
Mal7g2153 190 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Mal7g2153 190 Coils Coil 104 131 - -
Mal7g2153 190 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Mal7g2153 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 14 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2153 Mal-Chr7 76985429 76987094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2153 20 190 AS2 family AT1G07900 68.000 5.57e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal7g2153 LOB 7.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2153 - - ccaj:109798760 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2153 7 76985429 76987094 Mal7g2153 7 76985429 76987094 ECH
Mal4g0724 4 8021436 8023926 Mal7g2153 7 76985429 76987094 PCT