Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2139 ATGCTGAAATTATATAGCACATTGGCTACACAACAACCAAAGAGGCATTTGTTGACTACTGGTTGGAGTGTTTTTATCAGCACAAAAAGACTTTTTGCTGGAGATTTTGTTCTTTTTATTAGAGATGAAAAGCAGCAACTTCTTTTAGGTTTGAGGCGCGCTAATAGACAACAGCCAGCGCTTTCTTCATCAGTGATATCGAGTGACAGTATGCATATTGGCATTTTAGCTGCTGCAGCTCATGCTGTTGAAGAAGATGCAACAATGAAAAATAAATACAAAACATGA 288 0.375 MLKLYSTLATQQPKRHLLTTGWSVFISTKRLFAGDFVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAAAHAVEEDATMKNKYKT* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2139 95 SUPERFAMILY DNA-binding pseudobarrel domain 11 82 IPR015300 -
Mal7g2139 95 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 84 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g2139 95 PANTHER AUXIN RESPONSE FACTOR 19 12 84 - -
Mal7g2139 95 Pfam B3 DNA binding domain 10 54 IPR003340 GO:0003677
Mal7g2139 95 Gene3D - 4 54 IPR015300 -
Mal7g2139 95 ProSiteProfiles B3 DNA-binding domain profile. 1 55 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2139 Mal-Chr7 76432669 76433039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2139 12 76 B3 DNA Binding Superfamily AT1G19850 76.923 8.32e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal7g2139 B3 3e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2139 K14486 - gmx:100804628 129.413