Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2132 ATGGATTTTGAAGCAAGTATTAAGGAAAAATTAACATATTTTCGTATAAAAGAGCTCAAAGATGTGCTGACTCAGTTAGGGCTTTCAAAACAGGGAAAGAAGCAGGATCTCGTCGATCGGATATTATCCATTCTCTCAGATGAACAAGTTTCCAAAATATGGGCTAAGAAGAATGCTGTTGGGAAAGAGCAGGTGGCAAAATTAGTGGATGACACATATAGGAAAATGCAGATATCGGGGGCCACTGATCTAGCATCAAAGGGTCAGGTTGTGTCAGATAGTAGTAATGTGAAGGTTAAAGCTGAAGTTGAAGATTCCTTTCAAATTCAATCTGCTACAACTACAAAGATTCGTTGTCTCTGTGGAAGTACATTGGAAACAGAGGATTTGATCAAGTGTGATGATGCAAGATGCCAAGTGTGGCAACACATCAGTTGCGTTATTATTCCAGAGAAACCTATGGAAGGCATCCCACCAGTTCCTGAGAAATTTTATTGTGAACTATGTCGACTTAGTCGTGCAGACCCGTTTTGGGTTTCAGTATCTCATCCTTTGTTACCTGTGAAGTTGGCCACAACCACTATTCCAACTGATGGTACCAACCCAGTGCAGTGTGTGGAGAGAACATTTCAACTCACAAGAGCAGACAAGGAAATGGTATCAAAACAAGATTTTGATGTTGAGGCTTGGTGTATGCTTCTGAACGACAAGGTTCCATTCAGGATTCAATGGCCACAGTATACAGACCTAGCGGTCAATGGTCTTCCTATTCGAACAACTAATAGACCCGGTTCACAATTGCTTGGGGCTAACGGTCGTGATGATGGTCCAATTATCACGCCGCATACAAAAGATGGAATTAATAAGATTTCCTTAACAGTATGTGATGCTCGCATATTTTGTTTAGGTGTTCGCGTTGTTAGAAGGCGCAGTTTGCAACAGATCCTAAACTTAATTCCAAAGGAGTCTGACGGTGAGCCTTTTGAAGATGCTCTTGCACGCGTCTGTCGTTGTGTTGGGGGTGGAAATGCAGCTGACAATGCTGATAGTGACAGTGATTTGGAAGTGGTTTCAGATACTTTCAGTATAAACCTTCGTTGTCCGATGAGTGGTTCAAGAATGAAGACTGCTGGAAGATTCAAACCTTGCATTCACATGGGTTGTTTTGATCTTGATGTTTTTGTGGAAATGAATCAACGGTCAAGAAAGTGGCAATGTCCTATATGTCTCAAAAACTATGCATTGGAGAATATCATCATTGACCCTTATTTCAACCGCATCACTTCTATGATGATTAATTGCGGTGAAGATGTTACAGAGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTTAAGGCAAAGAGTGAAAGTGAACGTCTGGATTTAGGGATTCTTGGCCAATGGCATCTTCCTAATGGATCCCTTTGTGCATCTACTGCTGGAGATATCAAGAGAGTAGAAACACTGAAGCAAGTAAAACAGGAAGGTTTTTCAGACGGGCCTGCTGGTTTAAAACTTGGCATTAGGAGGAATCGCAATGGAAATTGGGAAGTCAGTAAGCCCGAGACAACAAACACCTCTTCTGGTCATATATTAAAAGAGGTTTTTGGAAATCCTGAACAAGTTGTTATTCCAATGAGCAGCAGTGGCACTGGAAGTGGTCGGGATGGTGATGATCCCAGTGTTAACCAGGGTGGTGGTGGGCATATTGATTATTCTACTACCAATGGAATTGAGATGGATTCTCAGTCTCTCAGTAATGTTGATTTAGCTCGTGGATATACTGTGCATAACACATCTGCTCAGGTGGGTGGTGCAGAAATAATTGTTCTTAGCGACTCCGAAGAAGACAACGACATGTTGGTGTCTCCTGCAATTGCAAATAACAACAACCAAAATGATACTGCAGATGGTTACTCCATGCCACCACCTGGAATTGTTGACCCATACGCTGAAGATCAGAATCTCGGTGGAAATTCATGCTTGGGGCTTTTTCCTAATGAAGATGATTTTGGAATATCTTCTCTGTGGTCATTGCCTTCTGCATCTCAGGCTGGTCCAGGATTCCAGTTGTTCGGTTCTGATGCAGATGTCTCTGATGCATTGGTTCATTTGCAGCATGGTCCTATTAATTGCACCTCTTCACTGAACGGCTATGCATTGGCTCCTGAAACTGCTTTGGGATCTAGTAGTCTCTTACAAGATTCCTCTGCTGGACGGTCAGATCCTGACTTAAACGGTGGTTTGGTTGACAACCCATTGGCATTTGCTGGAGATGATCCCTCACTTCAGATTTTTCTCCCCACAAGACCAGCTGAGTCATCTATGCAGAATGAGTTGAGAGATCAAGCAAATGTCTCTAATGGTGTCTCCACTGAAGATTGGACATCTCTTACTCTCGGAGGTGGTGCTGGTGGCAGTAATGGCGATGATTCCACTCAAAATGGATTGAATTCTAGACACCAAGTCCCATCCAGAGACAATGGCACAAATACTTTGGCTGATTCTGCTTCTTTGCTTCTTGGTATGAATGATGTAAGATCTGACAAAGCAAGTAGACAAAGGTCAGGTAGTCCTTTCACATTTCCTCGCCAAAAACGTTCTGTAAGGCCCCGCTTGTACCTTTCTATTGATTCAGATTCGGAATAA 2649 0.4277 MDFEASIKEKLTYFRIKELKDVLTQLGLSKQGKKQDLVDRILSILSDEQVSKIWAKKNAVGKEQVAKLVDDTYRKMQISGATDLASKGQVVSDSSNVKVKAEVEDSFQIQSATTTKIRCLCGSTLETEDLIKCDDARCQVWQHISCVIIPEKPMEGIPPVPEKFYCELCRLSRADPFWVSVSHPLLPVKLATTTIPTDGTNPVQCVERTFQLTRADKEMVSKQDFDVEAWCMLLNDKVPFRIQWPQYTDLAVNGLPIRTTNRPGSQLLGANGRDDGPIITPHTKDGINKISLTVCDARIFCLGVRVVRRRSLQQILNLIPKESDGEPFEDALARVCRCVGGGNAADNADSDSDLEVVSDTFSINLRCPMSGSRMKTAGRFKPCIHMGCFDLDVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMINCGEDVTEVEVKPDGSWRVKAKSESERLDLGILGQWHLPNGSLCASTAGDIKRVETLKQVKQEGFSDGPAGLKLGIRRNRNGNWEVSKPETTNTSSGHILKEVFGNPEQVVIPMSSSGTGSGRDGDDPSVNQGGGGHIDYSTTNGIEMDSQSLSNVDLARGYTVHNTSAQVGGAEIIVLSDSEEDNDMLVSPAIANNNNQNDTADGYSMPPPGIVDPYAEDQNLGGNSCLGLFPNEDDFGISSLWSLPSASQAGPGFQLFGSDADVSDALVHLQHGPINCTSSLNGYALAPETALGSSSLLQDSSAGRSDPDLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSMQNELRDQANVSNGVSTEDWTSLTLGGGAGGSNGDDSTQNGLNSRHQVPSRDNGTNTLADSASLLLGMNDVRSDKASRQRSGSPFTFPRQKRSVRPRLYLSIDSDSE* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2132 882 CDD PHD_Bye1p_SIZ1_like 118 169 - -
Mal7g2132 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 175 IPR013083 -
Mal7g2132 882 SMART PHD_3 118 170 IPR001965 -
Mal7g2132 882 MobiDBLite consensus disorder prediction 732 753 - -
Mal7g2132 882 Pfam SAP domain 14 42 IPR003034 -
Mal7g2132 882 MobiDBLite consensus disorder prediction 772 838 - -
Mal7g2132 882 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 813 - -
Mal7g2132 882 SUPERFAMILY FYVE/PHD zinc finger 113 173 IPR011011 -
Mal7g2132 882 MobiDBLite consensus disorder prediction 772 882 - -
Mal7g2132 882 SMART sap_9 11 45 IPR003034 -
Mal7g2132 882 CDD SP-RING_Siz_plant 364 412 - -
Mal7g2132 882 Pfam MIZ/SP-RING zinc finger 363 411 IPR004181 GO:0008270
Mal7g2132 882 MobiDBLite consensus disorder prediction 543 558 - -
Mal7g2132 882 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 813 - -
Mal7g2132 882 ProSiteProfiles Zinc finger SP-RING-type profile. 350 433 IPR004181 GO:0008270
Mal7g2132 882 Pfam PHD-finger 118 170 IPR019787 -
Mal7g2132 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 341 451 IPR013083 -
Mal7g2132 882 SUPERFAMILY SAP domain 3 64 IPR036361 -
Mal7g2132 882 Gene3D SAP domain 1 62 IPR036361 -
Mal7g2132 882 MobiDBLite consensus disorder prediction 543 571 - -
Mal7g2132 882 ProSitePatterns Zinc finger PHD-type signature. 119 169 IPR019786 -
Mal7g2132 882 ProSiteProfiles Zinc finger PHD-type profile. 116 172 IPR019787 -
Mal7g2132 882 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2132 Mal-Chr7 76321102 76332010 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal7g2132 PHD 3.2e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2132 - - aprc:113857557 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2132 7 76321102 76332010 Mal7g2132 7 76321102 76332010 ECH
Mal4g0714 4 7831365 7840444 Mal7g2132 7 76321102 76332010 PCT