Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2128 ATGGAAATTGATCTGAACAATGAAGTGACTGAGCTTGAGAATAATGCATTGTGCATCAAGGAATGTGAAAAAGGTTTTTGTTTTTGTGTTTATTCTTTGTCCCCTTCAACTTGTTCATCTTCTAGTTCAACTTCACCACTTGTGTCTTCTTCTTATCTTGAACTATGGCATGCTTGTGCTGGTCCTCTTACTTCACTTCCTAAGAAAGGAAATGTTGTGGTTTATTTTCCACAAGGTCACTTAGAACAATTTGCTTCTTTCTCTCCTTTTAAACAATTGGAGATACCAAACTATGATCTTCAGCCTCAGATCTTTTGCAGGGTTGTAAATGTTCAGCTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAAGTTACTTTGCTTCCTCAGGCTGAGTTGGCAGGGATGCATATGGAGGGAAAAGAAGTTGAGGAATTAGAAGGAGATGAAGAGGGAGATGGAGGGTCACCTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTTTCTGATACCAGCACTCATGGGGGATTCTCTGTGCCTCGTAGAGCTGCTGAAGACTGTTTTCCCCCTTTGGATTATAAGCTGCAGAGACCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAATGGAAATTTCGTCATATTTATAGAGGTCAGCCAAGGCGGCATCTACTCACTACTGGTTGGAGCATTTTTGTTAACCAAAAGAATCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTGAGATTGGGAATCAGAAGAGCTGTTAGACCAAGAAATGGTCTTCCAGAATCAATTGTTGGTAGCCAGAACTGCTATCCCAATTTCCTTTCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGTCATGCAGAATTTGTTGTTCCCTACCAAAAGTATGTTAAAAGTATCAAGAATCCGGTGACCATAGGGACAAGATTCAAAATGAGAATTGAAATGGATGAATCACCGGAAAGAAGGTGTAGTAGTGGTATGTTGATTGGAATAAATGACTTGGATCCCTATCGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAAAATACGGAGACTAATCATCAAGACCGAGTATCGCCATGGGAGATTGATCCTTCTTCTCCTCAGCCTTCCCTAAGCATTCAGTCTTCCCCAAGACTGAAGAAACCGCGGACCGGTCTGCAGATTGCCTCGCCCAATCACCTCATCACTGGTATTAATCCTAATGGAATCAGTGGAATGATGGGCTTTGAGGAGTCACTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCGCTATACTACGGATGTGACAAAGTAACCAACCCGCCAGGTTTTGAGTTGAGCGATTCAAGTCATCATCAAAATCTTGCATCAACTGGAGTAGGAAAAGTAGTTACCTCTTCTGAGCTTATGAGTGTTCATCCTTTCAGTTATGCAGGCTTTATGGAAAATAACAAATTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAATTCAAATCCCTTACAGGAAAAGTTGATTTCAACATTGGTGCTTGGGGAACCAAACCCAATTTTCAATCTTCATATTTTCCTTATGGAGATATTCACAAAGCTAATCAAGATAACATGTTTAGCTCAAAACTCACCAATTTCCGAAGTGATAACGTCCCGTTTAACACACCATTGATAGTGGCAGGGAACATTAGAAATGAAGTTGGAAGATCTGAATCTAATCTTCAAAATGTGCATAAGCTTCAGGAAAATATTTCTGCTGCTGCTTCATTAGGAGATACTAATATGAAGGTTCCAAATGATAACAATGTCACGGGAAAAGTAAATTCCTGTAAACTATTTGGGTTTCCTTTGTCTGCGGAAACTAGTACTCAAAATTTACAGAACATTGCAAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGCAGCATAGTTGGAAGAGCCATTGATCTCTCGAGGTTGAGCGGCTACGTCGATCTTCTGAGTGAACTAGAGAAACTATTTGGAATGGATGGACTTCTTAGAGATTCTGATAAGGGATGGAGGATCCTTTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCGTGGCATGAGTTTTGTGATGTTGTGTCTAAGATCCATATATATACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGACCAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATTATTGAACCTTCAAAATCTTCCTCAGTTGGTCAGCCAGATTGTTCTCCAACAGTAGTTAGAGTCTGA 2373 0.4062 MEIDLNNEVTELENNALCIKECEKGFCFCVYSLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGSQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDENTETNHQDRVSPWEIDPSSPQPSLSIQSSPRLKKPRTGLQIASPNHLITGINPNGISGMMGFEESLRSPKVLQGQENTGFMSLYYGCDKVTNPPGFELSDSSHHQNLASTGVGKVVTSSELMSVHPFSYAGFMENNKFPRVLQGQEICKFKSLTGKVDFNIGAWGTKPNFQSSYFPYGDIHKANQDNMFSSKLTNFRSDNVPFNTPLIVAGNIRNEVGRSESNLQNVHKLQENISAAASLGDTNMKVPNDNNVTGKVNSCKLFGFPLSAETSTQNLQNIAKRSCTKVHKQGSIVGRAIDLSRLSGYVDLLSELEKLFGMDGLLRDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMTNDDTHSCLDQAPVIIEPSKSSSVGQPDCSPTVVRV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2128 790 PANTHER AUXIN RESPONSE FACTOR 15 778 - -
Mal7g2128 790 SMART B3_2 166 268 IPR003340 GO:0003677
Mal7g2128 790 Gene3D - 164 268 IPR015300 -
Mal7g2128 790 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Mal7g2128 790 MobiDBLite consensus disorder prediction 144 163 - -
Mal7g2128 790 SUPERFAMILY CAD & PB1 domains 664 741 - -
Mal7g2128 790 Gene3D - 658 751 - -
Mal7g2128 790 Pfam Auxin response factor 292 374 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal7g2128 790 MobiDBLite consensus disorder prediction 391 414 - -
Mal7g2128 790 MobiDBLite consensus disorder prediction 385 419 - -
Mal7g2128 790 SUPERFAMILY DNA-binding pseudobarrel domain 158 277 IPR015300 -
Mal7g2128 790 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 778 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g2128 790 ProSiteProfiles PB1 domain profile. 662 744 IPR000270 GO:0005515
Mal7g2128 790 ProSiteProfiles B3 DNA-binding domain profile. 166 268 IPR003340 GO:0003677
Mal7g2128 790 CDD B3_DNA 164 266 IPR003340 GO:0003677
Mal7g2128 790 Gene3D - 330 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2128 Mal-Chr7 76294312 76299014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2128 48 790 B3 DNA Binding Superfamily AT5G60450 60.502 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal7g2128 B3 6.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2128 - - gmx:100783513 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2128 7 76294312 76299014 Mal7g2128 7 76294312 76299014 ECH
Mal4g0713 4 7825595 7829780 Mal7g2128 7 76294312 76299014 PCT