Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2121 ATGATGTCCAAACAACCCTTTTCAGTTTCACCTCATTCCAATTCCAACACCATGAGAGCTTCCTCATCAAACCCTAATCCAAATCCAGTTCCACCAAAGAAAAAAAGAAACCTTCCAGGAACACCAGATCCGGATTCAGAAGTGGTAGCTATGTCACCAAAGTCATTGATGGCGACAAACCGTTTCTTATGTGAAATTTGCAACAAGGGTTTCCAGAGAGACCAGAATTTGCAACTTCATCGACGCGGACACAATCTTCCATGGAAGCTGAAGCAAAGAGCCAACAAAGATCAAGTTAGAAAGAAGGTTTATGTATGTCCTGAGAAGACATGTGTGCACCATGAACCTTCTAGAGCTTTGGGAGATTTGACAGGAATAAAGAAACATTACAGTAGAAAACATGGAGAAAAGAAGTGGAAGTGTGAAAAGTGTTCCAAGAAATATGCAGTTCAATCTGATTGGAAAGCTCATAGCAAGATTTGTGGAACTAGAGAGTATAAATGTGATTGTGGCACCATTTTCTCCAGGAAGGACAGTTTCATAACACATAGAGCTTTTTGTGATGCATTAACTGAACAAAGTGCAAAGATAACAACGGTTCCAGCAGCTTTAAGCAACTTTAGGAATGATCATTTGATAAATACTCAAACTCCAAGAATCCCTCACATTTTTCCTGGTTTTCAGTTTCACTCAGAAGAACCATTGAGGTTGCAGCCACTATGGCCAGTATTAGACCAAGCAAATTCTCAGCTACTTCATCAAAATTCTGACATAATGCAAACAATGGATGTGTTTGGATCACAAACACAAACATGGCTGAATTATAATTATAATAGTAATAGTAACAATAATCTATCTTTGCCAATGTTACAAGGAGTTATGAAGCAAGAACAAGAAGAAAACAAAGATTTGTCTGGTAGTGTAATAAGCTCTTTGTACTTGAGTAGTAGTCAGAATCAGAATCAACAAGGAGGAGAAAATCACATGTCAGCAACAACATCACTATTGCAGAAAGATTCTCAAATGGGATCTACAAGGACAATAATTAGCAATGATAACAACACACTCTTCAACAATGTGAACCACTTTAACATTGTTCATGAGGTTCAGAAATTTTATAACAAGCAAAGTGAAAATGAAGAGTTGAATGAGTTGGTGAATTTGGAAGGAAGCAATAGCTCTAATCTTGGAGGTGGTGGATATTTATGTAATGATTCAAATTCAAACAATTTGTTTGGGATTGTGAATTGTACAAAGGATTTAGATCAAGTGGTAAAGTCAATGGACAAAGAGAAAAACCAAATGGGATTTACAAGAGATTTTCTTGGAGTTGGAGATGATGATTCAATGAGTAGACCTTTTTTGCAGCAAGAACTTGGTGAATTTAATGGAATGGGATCATTAGGGAATAATCTCCAGAACCAGTATGGTGGTGGACACTACTGCTAG 1449 0.372 MMSKQPFSVSPHSNSNTMRASSSNPNPNPVPPKKKRNLPGTPDPDSEVVAMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRANKDQVRKKVYVCPEKTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAFCDALTEQSAKITTVPAALSNFRNDHLINTQTPRIPHIFPGFQFHSEEPLRLQPLWPVLDQANSQLLHQNSDIMQTMDVFGSQTQTWLNYNYNSNSNNNLSLPMLQGVMKQEQEENKDLSGSVISSLYLSSSQNQNQQGGENHMSATTSLLQKDSQMGSTRTIISNDNNTLFNNVNHFNIVHEVQKFYNKQSENEELNELVNLEGSNSSNLGGGGYLCNDSNSNNLFGIVNCTKDLDQVVKSMDKEKNQMGFTRDFLGVGDDDSMSRPFLQQELGEFNGMGSLGNNLQNQYGGGHYC* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2121 482 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g2121 482 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Mal7g2121 482 Gene3D Classic Zinc Finger 117 197 - -
Mal7g2121 482 SUPERFAMILY beta-beta-alpha zinc fingers 61 159 IPR036236 -
Mal7g2121 482 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 450 - -
Mal7g2121 482 MobiDBLite consensus disorder prediction 1 49 - -
Mal7g2121 482 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 84 IPR013087 -
Mal7g2121 482 PANTHER PROTEIN INDETERMINATE-DOMAIN 13-RELATED 8 450 - -
Mal7g2121 482 Gene3D Classic Zinc Finger 41 116 - -
Mal7g2121 482 SMART c2h2final6 139 159 IPR013087 -
Mal7g2121 482 SMART c2h2final6 104 134 IPR013087 -
Mal7g2121 482 SMART c2h2final6 62 84 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2121 Mal-Chr7 75514087 75516305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2121 33 445 IDZ Gene Family AT3G45260 48.276 6.38e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g2121 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0708 4 7777541 7780023 Mal7g2121 7 75514087 75516305 PCT