Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2104 ATGGAAACTCAAAGCAAAGAGGCGGGCAAAATGAGTTCTGAAGAAAATAAACATGTCACTGAGGATCATGATGATGAAGATGCTTCTTCTTGCAGAAGAACAGTTTCTCTTCCTGTTGTTCACAAGGATAATGATTCAATGGGGATAACTGAAGAAATATCACATGTTCCTCCTAGGAAGAAACAAAATCTTCTCCTAGAAATACCATCAAGAACACCAGAAGAGTGTTCAGAAGATTTTGTTGCAATCAAAATGCCAATGACACCAAGTCCTACTCCAACTCCTACTCCCAAGAGAGTGAATTTTCTTATGACTTCTCGCTCGGTTGATGCTCCGGCAAATAATTCTCCAGGATCAAAAGGCAAATCATCCATAAGAAAGATGCTACCAAAATTGAGTTTCAGGTATCGGACACCGGCAGATATTGAAAAGGCGAATACACCAACTCGGGAAGTTTCCTCTTCGAGCACTCGAGAAAAGCCTTTAATATCAAGATCATTGTCCCTTGGTAAAATATTTACTCCTAGGATGAAAAGAACTTCATCATTGCCATTAGGAGAAATTGGACATTCAAACCCTGAATCTACTCATGGTGGAAATGGAAGTGTTGGTGGTCCTCTCAGTAAAAAAGAGACTCGGCAAAAGATAGCGCGTTCTCTTTCAATGCCTGCCAACAATAACAAGGACAAAAGTATAAGGAGGATGGATTCGTTTTTTCGCGTTGTTCCTTCTATTCCTCGAGTAAAGGAAGGAAATGAATTGTTGAACACGTCCCCGCCAAAGGATACTGAAATCGAAGATAATGATGATGATGGTGAAGATATACCTGAAGAAGAGGCAGTGTGTAGAATCTGTCTGGTTGAATTATGTGAAGGAGGTGAGACCTTCAAGTTGGAATGTAGCTGTAAAGGTGAACTTGCTTTGGCTCACAAAGAATGTGCTATTAAATGGTTTAGTATAAAGGGTAACAAGACTTGTGATGTCTGCAAAAAGGAAGTTACAAACCTTCCTGTTACTCTATTACGAATTCAAAGTGTTCGAAATCGGAATGGTGGATTGAGTAGAGCTCAGCTCGAAGATGTAAACGGGGTATGGCAGGAAGTTCCAGTGCTTGTCATTGTCAGCATGTTGGCCTATTTTTGTTTTCTTGAGCAACTGTTGGTTACAAAAATGGGAACCGGTGCAATTGCCATATCTCTTCCATTTTCCTGTGTACTAGGTCTGCTCTCCTCCATGACATCGTCAACCATGGTGAAGAGCAGGTTCATATGGATTTATGCATCTTTCCAGTTTGCTCTGGTGGTTCTCTTCGCGCATATATTTTACTCCTTGGTTCATGTGCAAGCAGTTCTGTCAATCCTTCTTGCAACATTTGCAGGTTTTGGTGTAGTAATGAGTGGAAGTTCTATCCTTGTTGAGTTTTTTAGATGGAGAAGGAGATGGCAGGCTTCATTAGAGCAACAACCTGGCCCTCTACCGATTACACAAGCAGGACAACAACCTCGAGCCATAAACACACCGCGCTCAGGCCCATCAAATTACAATCAATCTATAGTGCAAAATCAACAAGACTCAAATCAAAGCTGA 1587 0.4115 METQSKEAGKMSSEENKHVTEDHDDEDASSCRRTVSLPVVHKDNDSMGITEEISHVPPRKKQNLLLEIPSRTPEECSEDFVAIKMPMTPSPTPTPTPKRVNFLMTSRSVDAPANNSPGSKGKSSIRKMLPKLSFRYRTPADIEKANTPTREVSSSSTREKPLISRSLSLGKIFTPRMKRTSSLPLGEIGHSNPESTHGGNGSVGGPLSKKETRQKIARSLSMPANNNKDKSIRRMDSFFRVVPSIPRVKEGNELLNTSPPKDTEIEDNDDDGEDIPEEEAVCRICLVELCEGGETFKLECSCKGELALAHKECAIKWFSIKGNKTCDVCKKEVTNLPVTLLRIQSVRNRNGGLSRAQLEDVNGVWQEVPVLVIVSMLAYFCFLEQLLVTKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASFQFALVVLFAHIFYSLVHVQAVLSILLATFAGFGVVMSGSSILVEFFRWRRRWQASLEQQPGPLPITQAGQQPRAINTPRSGPSNYNQSIVQNQQDSNQS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2104 528 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 500 - -
Mal7g2104 528 CDD RING_CH-C4HC3_MARCH 282 330 - -
Mal7g2104 528 ProSiteProfiles Zinc finger RING-CH-type profile. 274 336 IPR011016 GO:0008270
Mal7g2104 528 MobiDBLite consensus disorder prediction 251 273 - -
Mal7g2104 528 SMART ringv_2 281 330 IPR011016 GO:0008270
Mal7g2104 528 MobiDBLite consensus disorder prediction 182 213 - -
Mal7g2104 528 SUPERFAMILY RING/U-box 278 333 - -
Mal7g2104 528 MobiDBLite consensus disorder prediction 106 163 - -
Mal7g2104 528 MobiDBLite consensus disorder prediction 147 163 - -
Mal7g2104 528 MobiDBLite consensus disorder prediction 1 50 - -
Mal7g2104 528 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 337 IPR013083 -
Mal7g2104 528 MobiDBLite consensus disorder prediction 489 528 - -
Mal7g2104 528 MobiDBLite consensus disorder prediction 1 31 - -
Mal7g2104 528 MobiDBLite consensus disorder prediction 185 202 - -
Mal7g2104 528 PANTHER OS02G0165000 PROTEIN 11 500 - -
Mal7g2104 528 MobiDBLite consensus disorder prediction 106 122 - -
Mal7g2104 528 Pfam RING-variant domain 282 329 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2104 Mal-Chr7 75228154 75236112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2104 266 336 C3H Transcription Factor Family AT2G37950 45.833 9.36e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2104 - - gmx:100788108 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2104 7 75228154 75236112 Mal7g2104 7 75228154 75236112 ECH
Mal4g0697 4 7622195 7625916 Mal7g2104 7 75228154 75236112 PCT