Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2085 ATGAAGGAAAGTGAAAAAGGGTTTTTGGATCCACAACTATGGCATGCTTGTGCTGGTGGAATGGTTCAGATACCTCAAGTGAACTCAAAAGTTTTCTACTTTCCACAAGGACATGCTGAACATGCTAACACAAACATTGATCTAAGGGTTTCAGTTCCACCACTGATTCTTTGTAAAGTTGTTGGTGTTAAATTCATGGCTGACCCTGAAACTGATGAAGTTTTTGCTGTAATGAAGCTTCTTCCTTTGAGAAATTCAGAGCTTGGTTATGATGAAGGTGGTGGTGGTGGTGGTGGTGATGGTTTGGAAAATTCAGAAAAGCCTGCATCTTTTGCTAAGACTTTGACTCAATCTGATGCAAACAATGGTGGGGGGTTTTCTGTTCCAAGATACTGTGCTGAGACAATCTTTCCGCGGCTCGATTACGCGGCTGAGCCGCCTGTTCAGACGGTGGTAGCGAAGGATGTTCACGGCGAGCTTTGGAAGTTTAGGCATATTTATAGAGGGACGCCGCGTAGGCACTTGCTTACAACAGGTTGGAGTAGTTTTGTGAACCAGAAGAAGCTTGTTGCCGGTGATTCTGTGGTGTTTCTGAGGTCTGAGACTGGTGAATTGTGTGTTGGAATCCGAAGGGCGAAAAAGGGAATTGGTGGTGGTTTTGATGGTTCATCTTGTGGTTGGACTTCAGGTTCTGGTTCTAACAATGGAAATTGTGGAATTGGACCTTTTGGGGCATTTTCTTTTTTCCTGAAAGAGGAGAATAAGACTTTGAGAAATGGTTGTTTTGATGGTAATTTGAGTGGAAGAGTGAGAGTGAGGGCTGAGGATGTTATGGAAGCTGTGAATTTGGCTGCTAATAACCAACCATTTGAAGTTGTTTACTATCCAAGAGCAAGCACTCCTGAGTTTTGTGTTAAGGCTTCAGCTGTGAGGGCTGCTATGAGTATTCAATGGTGTTCTGGGATGAGGTTCAAGATGCCCTTTGAAACTGAAGATTCTTCTAGGATTAGTTGGTTTATGGGAACAATTGCTTCTGTTCAGGTTGTTGATCCTATTCGCTGGCCTAATTCTCCGTGGCGCCTTCTTCAGGTTACATGGGATGAGCCAGATTTACTACAAAATGTGAAGCGTGTTAGCCCATGGTTGGTCGAATTAGTATCAAACGTACCAGTCATTCATTTCAGTCCTTTCACTCCACCGAGGAAGAAGCTGCGGTTTCCACCAAACCTCGACTTCCCCCTCGATGTTCAATTTCTGTCACCGACGTTTTCAGGCAACCAGCTCGGGCCAAACAGCCCTTTCTTTGGTTTATCTGACAATGCTCCTGCATGTATACAGGGAGCCAGGCATGCTCAATTTGGAGGAATATCTCTTTCAGATCTGAACCTTCATAACAATAAACTTCAGTTAGGTTTGTTTCCTACTAATATCCAGCACCTTGATGTGCATAATAGGATTTCAAATGGCAACAACAACATGATCAACAACGATAAGACTAAAGAAAGCTTATCATGCTTGTTGAGTATAGGGAAAAAATCTGATAAAAGTTTGGAGAAATCTCAATGTGATGATGTTGTTAAGAAACATCAGTTTTGTCTTTTTGGTCAACCGATACTCACTGAGCAACAAATTTCTAGAAACTGTTCTGAAAAAAACTCAGTAGACGAGAGTAAGGACAAAGAGAAGTGGTTTTTGGATGCATTTTCAGCAGGGAAAGGTTCTGATGCTGCTGAGTTTAGTTGGCAACTTGGTTTGGATATTGGTCATTGTAAGGTTTTCTTGGAGTCAGAAGATGTTGGAAGGACCCTTGATTTATCACTTCTTGGTTCTTATGAAGAGCTCTACAAGAAACTGGCTAACATGTTTGATTTAGAAAAGTCTGAGATGTTGAATCATGTTTTCTACCGTGATGCAACAGGTGCTGTGAAGCAAATTGGTGAAGAACCCTTCAGTGAATTCATGAAGTCAGCAAAAAGATTGACAATTCTGACAGATTCAGGCAGCAAAAATATCAGAGGGGCAAGGATTACAGGAACTCACAAAGGTGAACATGGATTGGATGCATCAAACAAAACAGGTCCTCTAAGCATATTTGCTTAA 2100 0.4195 MKESEKGFLDPQLWHACAGGMVQIPQVNSKVFYFPQGHAEHANTNIDLRVSVPPLILCKVVGVKFMADPETDEVFAVMKLLPLRNSELGYDEGGGGGGGDGLENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAAEPPVQTVVAKDVHGELWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSVVFLRSETGELCVGIRRAKKGIGGGFDGSSCGWTSGSGSNNGNCGIGPFGAFSFFLKEENKTLRNGCFDGNLSGRVRVRAEDVMEAVNLAANNQPFEVVYYPRASTPEFCVKASAVRAAMSIQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNVPVIHFSPFTPPRKKLRFPPNLDFPLDVQFLSPTFSGNQLGPNSPFFGLSDNAPACIQGARHAQFGGISLSDLNLHNNKLQLGLFPTNIQHLDVHNRISNGNNNMINNDKTKESLSCLLSIGKKSDKSLEKSQCDDVVKKHQFCLFGQPILTEQQISRNCSEKNSVDESKDKEKWFLDAFSAGKGSDAAEFSWQLGLDIGHCKVFLESEDVGRTLDLSLLGSYEELYKKLANMFDLEKSEMLNHVFYRDATGAVKQIGEEPFSEFMKSAKRLTILTDSGSKNIRGARITGTHKGEHGLDASNKTGPLSIFA* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2085 699 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Mal7g2085 699 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Mal7g2085 699 Gene3D - 109 213 IPR015300 -
Mal7g2085 699 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 676 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g2085 699 SMART B3_2 111 213 IPR003340 GO:0003677
Mal7g2085 699 Gene3D - 318 391 - -
Mal7g2085 699 PANTHER AUXIN RESPONSE FACTOR 2 676 - -
Mal7g2085 699 CDD B3_DNA 110 211 IPR003340 GO:0003677
Mal7g2085 699 ProSiteProfiles PB1 domain profile. 587 667 IPR000270 GO:0005515
Mal7g2085 699 Pfam Auxin response factor 280 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal7g2085 699 SUPERFAMILY DNA-binding pseudobarrel domain 105 212 IPR015300 -
Mal7g2085 699 Gene3D - 587 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2085 Mal-Chr7 74666843 74670270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2085 3 672 B3 DNA Binding Superfamily AT2G28350 57.947 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal7g2085 B3 3.1e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2085 - - gmx:100814686 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2085 7 74666843 74670270 Mal7g2085 7 74666843 74670270 ECH
Mal3g4198 3 120912481 120914824 Mal7g2085 7 74666843 74670270 ECH
Mal1g3051 1 45256666 45259616 Mal7g2085 7 74666843 74670270 ECH
Mal4g0677 4 7322680 7325740 Mal7g2085 7 74666843 74670270 PCT