Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2083 ATGAAGAATAGTTGGTTTTTTGACAAGAATTTTAATGGTGTGTCGGATGAGATTCTTGGTGACGTCGTTGAGTTTTTTGATTTTCCACTTGAAGATGTGGAAACTGATGGTGTGGAACAAGATTGGAATGATCAATTCAAACACCTTGAAGAACCATCTCTTGGTGTTTTCTCAGTACCATCATTTGAGCTACGCGGCGAAACTCAAAATGAGAAGCCAAAACTAGTGAACAGTTTCTCTACTGTTCTTGGAAAGACTTCTGGACCTGCATATGGCAAAACTATTCCCATTCAAAACGTGTCCTTCAAAGGAACAAATTTACGTGGATGCCGAACCTACAGCCCAGTTTCAGTTTTTGAAAGCAGTAGTTATTCCTTGGTTGAGAATTTCATCTTTGAGTTACCAGTGATCCCGGCAAAGCGTCCTCGCAGTAAACGCCGGCGCCTCTCAAGCTTCAACAAGCTGTTCTCAATTCCATTCATATCTGCTTTTCAAAAAAATCAATTGGATAAACAGCGTGCTGGTAAATCATTATGCAGAGTCCAAAGAAAGGTAAGGAAAAACGATATCTCCTGGCTCTCTGATAGCATTAAGATGAAGGGATCCTCTTTACAGGAATCGATTGCTCCTAGAAAATGTATGCATTGTGAGGTAACCGAGACGCCGCAATGGAGAGAGGGACCTAAGGGTCCTAAGACCCTATGCAATGCTTGTGGAGTTCGATACAGGTCCGGTCGTCTATTTCCTGAATACCGGCCTGCAGCTAGCCCAACCTTTGAACCATCAGTGCACTCAAATTCTCACAAGAAGGTCTTGGAAATCAGGAAAAATGTTAACCATGAGACTGTTAAAGGTTCCTCCATGTTGTATTTATCATCAAACCTTCCAGGATTTCTCTAG 900 0.42 MKNSWFFDKNFNGVSDEILGDVVEFFDFPLEDVETDGVEQDWNDQFKHLEEPSLGVFSVPSFELRGETQNEKPKLVNSFSTVLGKTSGPAYGKTIPIQNVSFKGTNLRGCRTYSPVSVFESSSYSLVENFIFELPVIPAKRPRSKRRRLSSFNKLFSIPFISAFQKNQLDKQRAGKSLCRVQRKVRKNDISWLSDSIKMKGSSLQESIAPRKCMHCEVTETPQWREGPKGPKTLCNACGVRYRSGRLFPEYRPAASPTFEPSVHSNSHKKVLEIRKNVNHETVKGSSMLYLSSNLPGFL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2083 299 ProSiteProfiles GATA-type zinc finger domain profile. 207 243 IPR000679 GO:0006355|GO:0043565
Mal7g2083 299 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 210 270 - -
Mal7g2083 299 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 22 277 - -
Mal7g2083 299 CDD ZnF_GATA 212 269 IPR000679 GO:0006355|GO:0043565
Mal7g2083 299 Gene3D - 204 281 IPR013088 GO:0006355|GO:0008270
Mal7g2083 299 SMART GATA_3 207 257 IPR000679 GO:0006355|GO:0043565
Mal7g2083 299 ProSitePatterns GATA-type zinc finger domain. 213 238 IPR000679 GO:0006355|GO:0043565
Mal7g2083 299 PANTHER GATA TRANSCRIPTION FACTOR 22 277 - -
Mal7g2083 299 Pfam GATA zinc finger 213 246 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2083 Mal-Chr7 74591353 74593989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2083 8 281 C2C2-Gata Transcription Factor Family AT1G08010 36.700 1.94e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal7g2083 GATA 1.7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2083 - - mtr:MTR_4g058910 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2083 7 74591353 74593989 Mal7g2083 7 74591353 74593989 ECH
Mal4g0674 4 7269581 7274404 Mal7g2083 7 74591353 74593989 PCT