Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2042 ATGGTTTCCGACGCTAGCAAGAAGAAAGCTGCTCAGAAGAAAGCCGCCGCCGCCGCTAAACGTGGTGGTAAGGCTGCCGCCGCCGCTGCTTCTTCCAAAGCTGCTGATAAGGTTGCTGATAAAATCAGTGATATGAAGATTTCGGATCGGACTTGTACTGGTGTTCTTTGCTCTCATCCTCTTTCTAGAGATATTCGGATAGAGTCTCTGTCGGTTACTTTTCACGGACATGATCTCATTGTTGATACTGAATTGGAGTTAAATTATGGAAGACGTTATGGTTTACTTGGATTAAATGGCTGTGGAAAGTCCACTCTACTTACTGCAATCGGAATGCGGGAACTTCCAATTCCTGAGCACATGGATATTCATCACCTTAGCAGGGAAATTGATGCCTCTGACATGTCTGCATTGGAAGCTGTCATAACCTGTGATGAAGAAAGGTTGAAACTGGAGAGAGAAGCTGAAACATTGGCAGCTCAGGATGATGGAGGTGGTGAAGCCCTTGAACGTATTTATGAAAGATTGGATGCCCTAGATGCATCAACTGCTGAAAAGCGTGCCGCTGAAATCTTACATGGTCTTGGTTTTGACAAGCAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGGGGTTGGAGAATGAGAATTGCATTAGCACGAGCTTTATTTATGAACCCTACCATTCTTCTACTTGATGAGCCAACTAATCATCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAAGTTTGAGCGTATTTTGGTTGTGATATCACATTCCCAAGATTTCCTTAATGGTGTCTGCACAAATATTATCCACATGCAAAGTAAGAAATTGAAGATGTACACTGGTAACTATGATCAATATGTTCAGACACGTGGTGACTTGGAAGAGAACCAGATGAAGCAGTACAAGTGGGAACAGGAGCAGATTGCCAACATGAAGGAGTATATTGCTCGATTTGGTCATGGTTCAGCAAAACTAGCTCGCCAGGCTCAGAGTAAGGAGAAAACTCTGGCAAAAATGGAACGAGGTGGACTCACAGAGAAGGTTGTCAGAGATCAAGTTTTAGTATTCCGCTTTACTGATGTGGGGAAACTTCCCCCTCCTGTTCTCCAGTTTTCTGAAGTAAGTTTTGGTTACACTCCTGAAAATCTTATCTACAAAAACATCGACTTTGGGGTTGACTTAGACTCTAGGATTGCTCTGGTTGGACCAAATGGTGCTGGAAAGAGTACACTGCTGAAGCTAATGACAGGTGATTTGTTTCCTAGTGATGGCATGGTCAAACGTCATAATCATCTTCGAATTGCACAATATCATCAGCACTTGGCTGAGAAGCTGGACTTGGACGTGCCTGCCCTTCAGTTTATGATGAATGAATACCCTGGAAATGAGGAAGAGAAGATGAGGGCAGCCATTGGGAGGTTTGGACTGACAGGTAAAGCCCAGGTGATGCCAATGAAGAACTTGTCTGATGGGCAAAAGAGTCGAGTGATATTTGCGTGGTTAGCTTGGAGGCAGCCTCAATTGCTACTTTTGGATGAGCCAACTAATCATTTGGATATCGAGACAATTGACTCTCTGGCTGAGGCATTGAATGAGTGGGATGGCGGCTTGGTGCTTGTTAGCCATGACTTTAGGCTCATTAATCAGGTGGCGCATGAGATATGGGTGTGTGCCGATCAGAAAGTGACCAGATGGGAGGGTGACATTATGGATTTCAAGAAGCATCTAAAGGCAAAGGCAGGGATATTGGACTGA 1776 0.4443 MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAADKVADKISDMKISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDTELELNYGRRYGLLGLNGCGKSTLLTAIGMRELPIPEHMDIHHLSREIDASDMSALEAVITCDEERLKLEREAETLAAQDDGGGEALERIYERLDALDASTAEKRAAEILHGLGFDKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFERILVVISHSQDFLNGVCTNIIHMQSKKLKMYTGNYDQYVQTRGDLEENQMKQYKWEQEQIANMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDQVLVFRFTDVGKLPPPVLQFSEVSFGYTPENLIYKNIDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLFPSDGMVKRHNHLRIAQYHQHLAEKLDLDVPALQFMMNEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQKSRVIFAWLAWRQPQLLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCADQKVTRWEGDIMDFKKHLKAKAGILD* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2042 591 CDD ABCF_EF-3 376 568 - -
Mal7g2042 591 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524
Mal7g2042 591 Gene3D - 341 588 IPR027417 -
Mal7g2042 591 Pfam ABC transporter 83 237 IPR003439 GO:0005524
Mal7g2042 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 571 IPR027417 -
Mal7g2042 591 Gene3D - 65 329 IPR027417 -
Mal7g2042 591 PANTHER - 1 591 - -
Mal7g2042 591 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 591 - -
Mal7g2042 591 CDD ABCF_EF-3 65 282 - -
Mal7g2042 591 Pfam ABC transporter 276 348 IPR032781 -
Mal7g2042 591 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 591 IPR003439 GO:0005524
Mal7g2042 591 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 65 305 IPR003439 GO:0005524
Mal7g2042 591 Pfam ABC transporter 392 523 IPR003439 GO:0005524
Mal7g2042 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 298 IPR027417 -
Mal7g2042 591 SMART AAA_5 89 291 IPR003593 -
Mal7g2042 591 SMART AAA_5 401 567 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2042 Mal-Chr7 73204720 73208206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2042 376 569 Calmodulin-binding Proteins AT2G36910 25.664 3.61e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2042 K06185 - gmx:100809491 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2042 7 73204720 73208206 Mal7g2042 7 73204720 73208206 ECH
Mal4g0635 4 6589721 6593353 Mal7g2042 7 73204720 73208206 PCT