Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2035 ATGGGAAGAGCTCCATGTTGTGACAAAACAAGTGTAAAGAGAGGTCCATGGTCACCAGAAGAAGACTCAAAGCTTAAAGACTACATAGAGAAACATGGAACTGGTGGGAATTGGATTTCTCTTCCTCATAAAGCTGGTCTCAAGAGATGTGGAAAAAGTTGTAGATTGAGATGGCTAAACTATCTTAGGCCCAACATTAAGCATGGGGATTTTTCTGATGAGGAAGACAGAATAATTTGCAGTCTCTATGTTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAATTGCCAGGTAGGACAGACAATGATATCAAGAACTATTGGAACACAAAGTTGAAGAAAAAACTCATGGCTTTGCAATTTCCTACATCATCACATCATCAAAGAAAACCACAATTTCCACCTTCTCCTTCTTCTCATCCATTCTTAGACTACTTTACTCACACACCAACATCATTCACAAATCTTCAAACCATTTCACTTCCTTCAAATAACTATCCAAACACAAGTTTCAACCCTTTTTACCAAACCCAAGATTCTATGATTAGTGTTAATCCTTCCATGCAATATAATAATTACTCTATCAAAGATAACATGTTTATGTTTGGAAGTGAAGGAAGTAGTTCATCTGATGGAAGTTGCAAAGAAATCAAGCAAGAAGAAATTGGTTATCATCATCAAATGACTAGTGTTGGATTTGATGACTACAATAATTATAACTTTATGATAAATGGTAACAATGGAAATATTGTTGGTGAAAGTGTTAACCAATATGAAGAAAAATCAATTGGAGTTGGATTTAGTTACAATAATGGTCAAAGTCAAAGTCAAACATTAACTCCATTACTAGATTATGGTCTTGAAGATATTAAACAATTGATCATTAGTAGCAGCAGTAACAAAGGTTTTAATGTTGATGAAATTCATAAGAATGAAGAGAATGCTATGTACTACTTCAACTACTGA 969 0.3426 MGRAPCCDKTSVKRGPWSPEEDSKLKDYIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMALQFPTSSHHQRKPQFPPSPSSHPFLDYFTHTPTSFTNLQTISLPSNNYPNTSFNPFYQTQDSMISVNPSMQYNNYSIKDNMFMFGSEGSSSSDGSCKEIKQEEIGYHHQMTSVGFDDYNNYNFMINGNNGNIVGESVNQYEEKSIGVGFSYNNGQSQSQTLTPLLDYGLEDIKQLIISSSSNKGFNVDEIHKNEENAMYYFNY* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2035 322 Gene3D - 7 68 - -
Mal7g2035 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mal7g2035 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mal7g2035 322 CDD SANT 16 62 IPR001005 -
Mal7g2035 322 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mal7g2035 322 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mal7g2035 322 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal7g2035 322 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mal7g2035 322 SMART sant 13 64 IPR001005 -
Mal7g2035 322 SMART sant 67 115 IPR001005 -
Mal7g2035 322 PANTHER OS09G0431300 PROTEIN 1 302 - -
Mal7g2035 322 PANTHER TRANSCRIPTION FACTOR RAX3 1 302 - -
Mal7g2035 322 MobiDBLite consensus disorder prediction 1 21 - -
Mal7g2035 322 Gene3D - 70 135 - -
Mal7g2035 322 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2035 Mal-Chr7 73044314 73046032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2035 1 121 MYB Transcription Factor Family AT5G57620 85.950 1.24e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g2035 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2035 K09422 - gmx:100779919 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2035 7 73044314 73046032 Mal7g2035 7 73044314 73046032 ECH
Mal4g0629 4 6506465 6507865 Mal7g2035 7 73044314 73046032 PCT