Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2021 ATGGGGGGAGATAAGAGAGGAGACTTGGTCCTTAACAACACCTCCTCGAAAAAAACTAGGGGTAGACCCATTGGCTCTAAGAACAGGGAAAAAGCACCCATCATTCTAAGTGAAAACACTGACAACCTTATGGAATTGATTATCATTGAGATCCCTTCAGGCAACGATGTTGTCGGGACTCTTATCAATTTGGCTCATTGTTATCAAGCTGGCATCACAGTCTTGAGTGCTTCTGGTCTGGTTTCCAATGTCACGCTTCTCCAACCAATGTGTCGTGCTCCTAATATTCCAATCGAAGGTACGTACCAGATGATATCTTTATCTGGAACTTACATGCATGCCAGTTCTGGCTGTGTTCCACCCCAATTGATCGCGGAACCAGCATGTTCCTCCTTTTCTATTTTTGTGGATGACAATTGTGGAAATTACATGTTTGGAGGAACTGTTGGTGGGAAGGTTAAGGCTGCCAGTGTTGTTAGGATAACAGCAGCTCTGTTCAAAAATCCAGAGTTTCATAGGCTGGCCATCATCAATGGGATATTTGAAGAGGATGGCACAAAATGTGTTGGTGGTGTCATCCCCAACGTTGATGATTTTTCTTTTGAATCCAATGAAATGCTTCCAGCTGATGTGGACGTTGACATGGAGTGGAATCGCTCCCCTAGCACTTAA 672 0.4405 MGGDKRGDLVLNNTSSKKTRGRPIGSKNREKAPIILSENTDNLMELIIIEIPSGNDVVGTLINLAHCYQAGITVLSASGLVSNVTLLQPMCRAPNIPIEGTYQMISLSGTYMHASSGCVPPQLIAEPACSSFSIFVDDNCGNYMFGGTVGGKVKAASVVRITAALFKNPEFHRLAIINGIFEEDGTKCVGGVIPNVDDFSFESNEMLPADVDVDMEWNRSPST* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2021 223 SUPERFAMILY AF0104/ALDC/Ptd012-like 43 174 - -
Mal7g2021 223 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13 193 - -
Mal7g2021 223 Pfam Plants and Prokaryotes Conserved (PCC) domain 47 167 IPR005175 -
Mal7g2021 223 Gene3D - 45 180 - -
Mal7g2021 223 MobiDBLite consensus disorder prediction 1 31 - -
Mal7g2021 223 ProSiteProfiles PPC domain profile profile. 41 186 IPR005175 -
Mal7g2021 223 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 13 193 IPR014476 GO:0003680
Mal7g2021 223 CDD DUF296 47 118 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2021 Mal-Chr7 72623563 72624234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2021 17 206 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.417 2.76e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2021 - - mtr:MTR_4g057525 260.381