Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2013 ATGCATGATGCAAAATTGCGAATTGGATATGCCGAGCAAACTCTCTTGGCCGCGCTAGGCCAAGCTGTAGTGTACGCTAAAGAACATTCTAAACCGCCTCCTGAAATTAAGTCTCCTTTTGAAGAGGCGGCAAAGATTGTTAAAAAAATCTATTCTGTTCTTTCCGATTATGACAAAATTGTGCCTGCACTCCTTACGGGTGGTGTATGGAAACTTCCAAAGAAATGTGATTTTACTCCTGGTGTTCCGGTTGGGCCTATATATGTTGTTAAAAGCAACCAAGGGTGTATCTGA 294 0.4218 MHDAKLRIGYAEQTLLAALGQAVVYAKEHSKPPPEIKSPFEEAAKIVKKIYSVLSDYDKIVPALLTGGVWKLPKKCDFTPGVPVGPIYVVKSNQGCI* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2013 97 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 5 76 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mal7g2013 97 Gene3D - 1 87 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mal7g2013 97 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 4 86 - -
Mal7g2013 97 PANTHER DNA LIGASE 1 4 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2013 Mal-Chr7 72438341 72439522 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2013 4 87 Core DNA Replication Machinery Family AT1G08130 70.238 2.04e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2013 K10747 - gmx:100803989 139.428