Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal7g2011 | ATGGAAACCATGACAGAGTCCTATGATTCCACTAATACACACTCTTCTTCAAATTTTGGATGCACACATTATAGAAGGAGATGCAAGATTATAGCACCATGTTGCAATGAAGTTTTTGACTGTAGGCACTGCCACAATGAAGCTAAGAACTCGGATGAGATTAAACCAGTTGATCGTCATGATATTCCGCGTCATGAAGTTAAAAAGGTTATCTGCTCCTTATGTGACACAGAACAAGATGTTCAACAGTACTGCATAAACTGTGGAGTATGCTTGGGAAAGTACTTTTGTGCTACATGCAAATTCTTTGATGATGATATTTCAAAGCAGCAATACCACTGTGATGAATGTGGCATCTGCAGAACTGGTGGCAGTGATAACTTTTTCCATTGCAAAAGATGTGGATGTTGCTATTCCATGGAAATCAAAGAGGGGCATCATTGTGTAGAAAGAGCAATGCATCATAATTGTCCTATTTGCTTTGAGTATCTGTTTGATACATTGAGAGAAATCAGCGTCTTACCTTGTGGCCATACTATACATTTTGAGTGTGTTAAAGAGATGGAAAAACATCATAGGTACTCATGTCCTGTTTGCTCAAAATCTACCTGTGATATGTCAAATGTGTGGGAGCACCTTGACCAAGTGGTTTCCTCAACTCCAATGCCTGAATCATACAAAAATAAGAAGGTATGGATACTATGCAATGATTGTAGTGTAAACTCCCATGTGCAATTCCACATTGTGGCACATAAGTGTTTGAGTTGCAACTCATACAACACAAGGCAAATACAAGCAAGACCTTCTAGCTCATCATGCTCCTCTAGGGTGGCAGAGATGGTTAGATGA | 849 | 0.3934 | METMTESYDSTNTHSSSNFGCTHYRRRCKIIAPCCNEVFDCRHCHNEAKNSDEIKPVDRHDIPRHEVKKVICSLCDTEQDVQQYCINCGVCLGKYFCATCKFFDDDISKQQYHCDECGICRTGGSDNFFHCKRCGCCYSMEIKEGHHCVERAMHHNCPICFEYLFDTLREISVLPCGHTIHFECVKEMEKHHRYSCPVCSKSTCDMSNVWEHLDQVVSSTPMPESYKNKKVWILCNDCSVNSHVQFHIVAHKCLSCNSYNTRQIQARPSSSSCSSRVAEMVR* | 283 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal7g2011 | 282 | SUPERFAMILY | RING/U-box | 155 | 205 | - | - | |
Mal7g2011 | 282 | Gene3D | - | 228 | 270 | - | - | |
Mal7g2011 | 282 | ProSiteProfiles | Zinc finger RING-type profile. | 157 | 200 | IPR001841 | - | |
Mal7g2011 | 282 | SMART | ring_2 | 157 | 199 | IPR001841 | - | |
Mal7g2011 | 282 | Pfam | Zinc-ribbon | 204 | 262 | IPR039512 | - | |
Mal7g2011 | 282 | Pfam | Ring finger domain | 156 | 199 | IPR001841 | - | |
Mal7g2011 | 282 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 202 | IPR013083 | - | |
Mal7g2011 | 282 | SUPERFAMILY | Zinc hairpin stack | 93 | 150 | IPR037275 | - | |
Mal7g2011 | 282 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 8 | 280 | - | - | |
Mal7g2011 | 282 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RZFP34 | 8 | 280 | - | - | |
Mal7g2011 | 282 | ProSiteProfiles | Zinc finger CHY-type profile. | 14 | 90 | IPR008913 | GO:0008270 | |
Mal7g2011 | 282 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 92 | 156 | IPR017921 | - | |
Mal7g2011 | 282 | Pfam | CHY zinc finger | 21 | 102 | IPR008913 | GO:0008270 | |
Mal7g2011 | 282 | SUPERFAMILY | CHY zinc finger-like | 14 | 91 | IPR037274 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal7g2011 | Mal-Chr7 | 72423511 | 72427305 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal7g2011 | 19 | 275 | C2H2 Transcription Factor Family | AT3G18290 | 39.544 | 5.20e-55 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mal7g2011 | zf-CHY | 4.9e-18 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal7g2011 | K10144 | - | gmx:100812709 | 508.064 |