Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2010 ATGGATTTTTATCAAGAGACACTTGCCGACATCAACAATGACTATGAGCTACACGATTTCATTGATGATCCAAACTTTGATCAATTCATCAATTTGATTCGTGGGGATGAAAATGAGGATACTACTATTTGTAACTTCAATTCTGACCTTATAATGAATCAAAGCTTTGTTGATAACTCACTCCTTTCATTTCCTCCAGACCCATTTGATCACAACATAGATAATACTATTACTGCTTTTGATCCAACTTCTTCACTTAGTTCTTTCACTTGTTTTGATGGAGAAGCCAAGGAGAAAATAAGAGCAGAAAATGATGGTGATAATTACTCCTCTCCTACAACAACAACAAGCATTAACACAACAACTACAAGTGTTGATACTAAGCCAAAGTCGAAAAATGATAGATCCAAGACTTTGGTTTCTGAGCGGAGGAGGCGAAGCCGAATGAAGGATAAGCTTTACGCATTGCGTTCTTTAGTTCCCAATATAACTAAGATGGATAAGGCTTCTATAATTGGAGATGCTGTATCATATATGTATGAACTTCAATCACAAGCCAAGAAACTTACAGCAGAGGTTGCAGGACTTGAAGCATCCTTAGCAGTGTCCAAAACTCATCAAGGAATTTCAGTTGAAAATCCCAAAAAGATTCAATTTAGTGACAATAATGGTTCAATTTGCAAGAAGATTGTCCAGATTGATATGTTTCAAGTGGATGAAAGAGGGTTTTATGTTAAAATAGTATGCAATAAGGGAGAAAGGGTGGCTTCTTCATTGTACAAGTCTCTTGAATCTTTGAGAGATTTCAATATTCAGAATTCAAACTTGGCCACTGTTTCTGATGGTTTTCTACTTACATTTTCATTGAATGTGAAAGACACTGATCCAGAAATGAACCTGCCAAATTTAAAGCTATGGGTGATTAGTGCTTTTCTAAACCAAGGCTTTGAATTCATACCTTCTTTTCACACTTGA 975 0.3579 MDFYQETLADINNDYELHDFIDDPNFDQFINLIRGDENEDTTICNFNSDLIMNQSFVDNSLLSFPPDPFDHNIDNTITAFDPTSSLSSFTCFDGEAKEKIRAENDGDNYSSPTTTTSINTTTTSVDTKPKSKNDRSKTLVSERRRRSRMKDKLYALRSLVPNITKMDKASIIGDAVSYMYELQSQAKKLTAEVAGLEASLAVSKTHQGISVENPKKIQFSDNNGSICKKIVQIDMFQVDERGFYVKIVCNKGERVASSLYKSLESLRDFNIQNSNLATVSDGFLLTFSLNVKDTDPEMNLPNLKLWVISAFLNQGFEFIPSFHT* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2010 324 Pfam Helix-loop-helix DNA-binding domain 141 183 IPR011598 GO:0046983
Mal7g2010 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
Mal7g2010 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 198 IPR036638 GO:0046983
Mal7g2010 324 MobiDBLite consensus disorder prediction 102 146 - -
Mal7g2010 324 SMART finulus 139 188 IPR011598 GO:0046983
Mal7g2010 324 MobiDBLite consensus disorder prediction 106 127 - -
Mal7g2010 324 Gene3D - 125 199 IPR036638 GO:0046983
Mal7g2010 324 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 320 - -
Mal7g2010 324 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 320 - -
Mal7g2010 324 MobiDBLite consensus disorder prediction 128 146 - -
Mal7g2010 324 Coils Coil 179 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2010 Mal-Chr7 72386467 72389020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2010 13 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.118 4.53e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g2010 HLH 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2010 - - gmx:100805451 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2010 7 72386467 72389020 Mal7g2010 7 72386467 72389020 ECH
Mal4g0882 4 10926637 10928266 Mal7g2010 7 72386467 72389020 PCT