Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2003 ATGGGGTACAATGGCAAAGAAAATGGTAGTGGAGACTTGAGTTCTAATGCTAGGACATGGCTTAGTGCAATAATTGCACATGCAAATACATGCACGGACCAGCTGGTTGAAAGCGCTAATGATAATAAATTGTTTACTCAAATCTCCATTTCCATTGATGAAGTGATATCACTTGTTGATGAAATTCTCATCCAAATTAAGGTGTACTGTCGACTCCGATGGATCATCTCAGCGGTCAAGAGCAACTTCCTTTGTGGCCTATTAGCCAACTCCCTTCGCCAATTCTACACATATTGCAAAATCAGTGGCACCGTAGATTTCATTTTTGGATATGCCGCAGCAGTGTTTCAACACTGTCAAATATTGATAAAAAATGGGTTGCCAACACAAAAGAACACCATCACAGCTCAGGGAGGAGCGTACGCAGCTGACCAAGTATTTGGTTTCTCATTCCAGTTCTGCAAAATCTCAGCTGATCACGACCTCCTTCCTTCACTTAACTCTATTAAGACATACCTAGGAAGATTGTGGAAGCCTTACTCAAAAACAATTTTCATGCAATCTCTCCTAGGTGATGTATTGAGTCCAGAAGGTTGGTCAAGGTGGAACGATTCAGATTTTACTCTAGATACTCTCTATTATGCAGAGTATAATAATACTAGACCTGGAGCTGGAGTGCAAAATCGAGTTAAGTGGCAGAGGTACCATATCTTGAATGATTCCAACCAAGCTATAAACTTCATAGTTGCCCGACTAATTTCAGGAGATCAATGGTTGCGTGCAACAAGTGTCCCGTTCACATATGGATTCGAAGATCTTAACACCACCACAGAGAAATAA 840 0.4095 MGYNGKENGSGDLSSNARTWLSAIIAHANTCTDQLVESANDNKLFTQISISIDEVISLVDEILIQIKVYCRLRWIISAVKSNFLCGLLANSLRQFYTYCKISGTVDFIFGYAAAVFQHCQILIKNGLPTQKNTITAQGGAYAADQVFGFSFQFCKISADHDLLPSLNSIKTYLGRLWKPYSKTIFMQSLLGDVLSPEGWSRWNDSDFTLDTLYYAEYNNTRPGAGVQNRVKWQRYHILNDSNQAINFIVARLISGDQWLRATSVPFTYGFEDLNTTTEK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2003 279 ProSitePatterns Pectinesterase signature 2. 101 110 IPR033131 -
Mal7g2003 279 Pfam Pectinesterase 87 256 IPR000070 GO:0030599|GO:0042545
Mal7g2003 279 PANTHER PECTINESTERASE 87 270 - -
Mal7g2003 279 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 87 270 - -
Mal7g2003 279 Gene3D - 81 272 IPR012334 -
Mal7g2003 279 SUPERFAMILY Pectin lyase-like 79 269 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2003 Mal-Chr7 72274465 72276922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2003 87 270 Carbohydrate Esterase AT4G33220 55.435 1.47e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2003 K01051 - gmx:100798620 239.195